Detailed information NTG0675680

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG524_RS12065
• Genome accession: NZ_CP109404
• Coordinates: 2668778..2670079 (-)
• Length: 433 a.a.
• NCBI ID: WP_056785577.1
• Uniprot ID: A0ABS4VBV7
• Organism: Streptomyces sp. NBC_01520
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2663778..2675079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG524_RS12055 (OG524_12025)	-	2664950..2667571 (-)	2622	WP_405810167.1	valine--tRNA ligase	-
OG524_RS12060 (OG524_12030)	-	2667709..2668698 (+)	990	WP_405810169.1	hypothetical protein	-
OG524_RS12065 (OG524_12035)	clpX	2668778..2670079 (-)	1302	WP_056785577.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG524_RS12070 (OG524_12040)	clpP	2670236..2670919 (-)	684	WP_019992624.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG524_RS12075 (OG524_12045)	-	2671008..2671613 (-)	606	WP_164494208.1	ATP-dependent Clp protease proteolytic subunit	-
OG524_RS12080 (OG524_12050)	tig	2671888..2673297 (-)	1410	WP_405390844.1	trigger factor	-
OG524_RS12095 (OG524_12065)	-	2673949..2674143 (-)	195	WP_405393228.1	hypothetical protein	-

Sequence

Protein

• Length: 433 a.a.
• Molecular weight: 47458.26 Da
• Isoelectric Point: 4.7809

>NTDB_id=675680 OG524_RS12065 WP_056785577.1 2668778..2670079(-) (clpX) [Streptomyces sp. NBC_01520]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDDGGRHEKSA

Nucleotide

• Length: 1302 bp

>NTDB_id=675680 OG524_RS12065 WP_056785577.1 2668778..2670079(-) (clpX) [Streptomyces sp. NBC_01520]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAGCTCCCCAAGCCGCGGGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGCGCGAATCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACACTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCGAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCTGTACTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGTAACGCCCTGGTGAAGCAGTACCAACGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAAGCCATCGCCGACCAGGCGATCCTGCGCCAGACGGGCGCACGTGGTCTGC
GCGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACA
CCGGACGTCGTCCGCAACAACGTCAACCCGACACTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGACGGCGG
CCGCCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	92.841	0.594
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.15	0.508