Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MUA78_RS09405 Genome accession   NZ_CP095116
Coordinates   1907120..1908106 (-) Length   328 a.a.
NCBI ID   WP_262515126.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6156     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1902120..1913106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA78_RS09380 (MUA78_09380) - 1902380..1902727 (-) 348 WP_001242107.1 hypothetical protein -
  MUA78_RS09385 (MUA78_09385) - 1902913..1903506 (+) 594 WP_000224616.1 CYTH domain-containing protein -
  MUA78_RS09390 (MUA78_09390) - 1903610..1903975 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  MUA78_RS09395 (MUA78_09395) yjbH 1903998..1904804 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  MUA78_RS09400 (MUA78_09400) pepF 1905264..1907072 (-) 1809 WP_262515125.1 oligoendopeptidase F -
  MUA78_RS09405 (MUA78_09405) coiA 1907120..1908106 (-) 987 WP_262515126.1 competence protein CoiA Machinery gene
  MUA78_RS09410 (MUA78_09410) mecA 1908227..1908946 (-) 720 WP_001217727.1 adaptor protein MecA -
  MUA78_RS09415 (MUA78_09415) spxA 1909327..1909722 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  MUA78_RS09420 (MUA78_09420) trpS 1910017..1911006 (+) 990 WP_000448929.1 tryptophan--tRNA ligase -
  MUA78_RS09425 (MUA78_09425) opp4C 1911048..1911929 (-) 882 WP_001180271.1 oligopeptide ABC transporter permease -
  MUA78_RS09430 (MUA78_09430) opp4B 1911941..1912903 (-) 963 WP_000593417.1 oligopeptide ABC transporter permease -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38694.32 Da        Isoelectric Point: 9.6529

>NTDB_id=675585 MUA78_RS09405 WP_262515126.1 1907120..1908106(-) (coiA) [Staphylococcus aureus strain IVB6156]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAKKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=675585 MUA78_RS09405 WP_262515126.1 1907120..1908106(-) (coiA) [Staphylococcus aureus strain IVB6156]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTTAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTAA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTTG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966