Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MUA78_RS06385 Genome accession   NZ_CP095116
Coordinates   1260356..1261042 (+) Length   228 a.a.
NCBI ID   WP_078064899.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6156     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1255356..1266042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA78_RS06350 (MUA78_06345) yqeH 1255883..1256983 (+) 1101 WP_250406175.1 ribosome biogenesis GTPase YqeH -
  MUA78_RS06355 (MUA78_06350) aroE 1256997..1257803 (+) 807 WP_250406174.1 shikimate dehydrogenase -
  MUA78_RS06360 (MUA78_06355) yhbY 1257807..1258097 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  MUA78_RS06365 (MUA78_06360) nadD 1258100..1258669 (+) 570 WP_000725161.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA78_RS06370 (MUA78_06365) yqeK 1258659..1259243 (+) 585 WP_001019325.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA78_RS06375 (MUA78_06370) rsfS 1259244..1259597 (+) 354 WP_001088020.1 ribosome silencing factor -
  MUA78_RS06380 (MUA78_06375) - 1259600..1260316 (+) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  MUA78_RS06385 (MUA78_06380) comEA 1260356..1261042 (+) 687 WP_078064899.1 ComEA family DNA-binding protein Machinery gene
  MUA78_RS06390 (MUA78_06385) - 1261134..1261595 (+) 462 WP_000439693.1 ComE operon protein 2 -
  MUA78_RS06395 (MUA78_06390) comEC 1261600..1263801 (+) 2202 WP_025174647.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MUA78_RS06400 (MUA78_06395) holA 1263858..1264832 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  MUA78_RS06405 (MUA78_06400) rpsT 1264877..1265128 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25873.67 Da        Isoelectric Point: 9.7956

>NTDB_id=675570 MUA78_RS06385 WP_078064899.1 1260356..1261042(+) (comEA) [Staphylococcus aureus strain IVB6156]
MVLLYQFLLRYKDFLTQWKLYIISVVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSEISSLSKLEDVQVKDRDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVDPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=675570 MUA78_RS06385 WP_078064899.1 1260356..1261042(+) (comEA) [Staphylococcus aureus strain IVB6156]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGTTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAATTAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATAGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGACCCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.916

99.561

0.965
  comEA Staphylococcus aureus N315

96.916

99.561

0.965