Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MUA55_RS04960 Genome accession   NZ_CP095112
Coordinates   1017460..1018446 (+) Length   328 a.a.
NCBI ID   WP_252559461.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6157     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1012460..1023446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA55_RS04940 (MUA55_04945) - 1012897..1014543 (+) 1647 WP_038412973.1 IS1182-like element ISSau3 family transposase -
  MUA55_RS04945 (MUA55_04950) trpS 1014570..1015559 (-) 990 WP_000448933.1 tryptophan--tRNA ligase -
  MUA55_RS04950 (MUA55_04955) spxA 1015854..1016249 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  MUA55_RS04955 (MUA55_04960) mecA 1016620..1017339 (+) 720 WP_001217728.1 adaptor protein MecA -
  MUA55_RS04960 (MUA55_04965) coiA 1017460..1018446 (+) 987 WP_252559461.1 competence protein CoiA Machinery gene
  MUA55_RS04965 (MUA55_04970) pepF 1018494..1020302 (+) 1809 WP_000082722.1 oligoendopeptidase F -
  MUA55_RS04970 (MUA55_04975) yjbH 1020762..1021568 (-) 807 WP_000896691.1 protease adaptor protein YjbH -
  MUA55_RS04975 (MUA55_04980) - 1021591..1021956 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  MUA55_RS04980 (MUA55_04985) - 1022060..1022653 (-) 594 WP_000224620.1 CYTH domain-containing protein -
  MUA55_RS04985 (MUA55_04990) - 1022839..1023186 (+) 348 WP_045178589.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38782.40 Da        Isoelectric Point: 9.7086

>NTDB_id=675521 MUA55_RS04960 WP_252559461.1 1017460..1018446(+) (coiA) [Staphylococcus aureus strain IVB6157]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDIDYCHNKVKFNHFQSMFINPITRKL
HKFNLEKKQIIMFQQIQYLGGHKYVAEKKNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDHEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=675521 MUA55_RS04960 WP_252559461.1 1017460..1018446(+) (coiA) [Staphylococcus aureus strain IVB6157]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATATTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATAAGTTCAATTTAGAGAAAAAACAAATAATTATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAAGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGATCACGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

96.341

100

0.963
  coiA Staphylococcus aureus N315

96.341

100

0.963