Detailed information NTG0675284

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MUU70_RS01970
• Genome accession: NZ_CP095093
• Coordinates: 385827..386975 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain D103
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 380827..391975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUU70_RS01950 (MUU70_01955)	-	381224..381907 (-)	684	WP_176283115.1	ABC transporter ATP-binding protein	-
MUU70_RS01955 (MUU70_01960)	-	381922..383358 (-)	1437	WP_076851411.1	ABC transporter permease	-
MUU70_RS01960 (MUU70_01965)	-	383571..384254 (+)	684	WP_070081359.1	response regulator transcription factor	-
MUU70_RS01965 (MUU70_01970)	-	384241..385674 (+)	1434	WP_161941456.1	HAMP domain-containing sensor histidine kinase	-
MUU70_RS01970 (MUU70_01975)	rapC	385827..386975 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
MUU70_RS01975 (MUU70_01980)	phrC	386959..387078 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
MUU70_RS01980 (MUU70_01985)	-	387228..387323 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
MUU70_RS01985 (MUU70_01990)	-	387418..388782 (-)	1365	WP_176283117.1	aspartate kinase	-
MUU70_RS01990 (MUU70_01995)	ceuB	389197..390150 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
MUU70_RS01995 (MUU70_02000)	-	390140..391087 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
MUU70_RS02000 (MUU70_02005)	-	391081..391839 (+)	759	WP_071392129.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=675284 MUU70_RS01970 WP_003156336.1 385827..386975(+) (rapC) [Bacillus velezensis strain D103]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=675284 MUU70_RS01970 WP_003156336.1 385827..386975(+) (rapC) [Bacillus velezensis strain D103]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568