Detailed information NTG0674839

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG779_RS28195
• Genome accession: NZ_CP109354
• Coordinates: 6283083..6284381 (+)
• Length: 432 a.a.
• NCBI ID: WP_072483632.1
• Uniprot ID: A0A1K1UXB1
• Organism: Streptomyces sp. NBC_01563
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6278083..6289381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG779_RS28165 (OG779_28125)	-	6279037..6279231 (+)	195	WP_124717718.1	hypothetical protein	-
OG779_RS28180 (OG779_28140)	tig	6279887..6281293 (+)	1407	WP_124717719.1	trigger factor	-
OG779_RS28185 (OG779_28145)	-	6281559..6282164 (+)	606	WP_406486829.1	ATP-dependent Clp protease proteolytic subunit	-
OG779_RS28190 (OG779_28150)	clpP	6282242..6282925 (+)	684	WP_124717721.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG779_RS28195 (OG779_28155)	clpX	6283083..6284381 (+)	1299	WP_072483632.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG779_RS28200 (OG779_28160)	-	6284450..6285475 (-)	1026	WP_124717722.1	hypothetical protein	-
OG779_RS28205 (OG779_28165)	-	6285616..6288237 (+)	2622	WP_124717723.1	valine--tRNA ligase	-
OG779_RS28210 (OG779_28170)	-	6288308..6288760 (-)	453	WP_406485621.1	hypothetical protein	-
OG779_RS28215 (OG779_28175)	-	6288799..6289281 (-)	483	WP_124717724.1	response regulator	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47229.03 Da
• Isoelectric Point: 4.8824

>NTDB_id=674839 OG779_RS28195 WP_072483632.1 6283083..6284381(+) (clpX) [Streptomyces sp. NBC_01563]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=674839 OG779_RS28195 WP_072483632.1 6283083..6284381(+) (clpX) [Streptomyces sp. NBC_01563]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGTAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAAGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCCATCGAACTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGCGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCGAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGTTGCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGGGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCCGACGTCGTCCGCAACAACGTGAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGGCGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

3D structure

• AlphaFold DB: A0A1K1UXB1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509