Detailed information NTG0674758

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OH790_RS26440
• Genome accession: NZ_CP109349
• Coordinates: 5884130..5885416 (+)
• Length: 428 a.a.
• NCBI ID: WP_202201570.1
• Uniprot ID: A0ABQ3TIA3
• Organism: Streptomyces sp. NBC_01568
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5879130..5890416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH790_RS26405 (OH790_26350)	-	5879613..5879807 (+)	195	WP_030008564.1	membrane protein	-
OH790_RS26410 (OH790_26355)	-	5879810..5880412 (+)	603	WP_252309253.1	hypothetical protein	-
OH790_RS26425 (OH790_26370)	tig	5880970..5882358 (+)	1389	WP_406484055.1	trigger factor	-
OH790_RS26430 (OH790_26375)	clpP	5882635..5883252 (+)	618	WP_030008567.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH790_RS26435 (OH790_26380)	clpP	5883308..5883976 (+)	669	WP_272934852.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH790_RS26440 (OH790_26385)	clpX	5884130..5885416 (+)	1287	WP_202201570.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OH790_RS26445 (OH790_26390)	-	5885486..5886418 (-)	933	WP_202201571.1	hypothetical protein	-
OH790_RS26450 (OH790_26395)	-	5886546..5889167 (+)	2622	WP_202201572.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46860.78 Da
• Isoelectric Point: 4.8189

>NTDB_id=674758 OH790_RS26440 WP_202201570.1 5884130..5885416(+) (clpX) [Streptomyces sp. NBC_01568]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=674758 OH790_RS26440 WP_202201570.1 5884130..5885416(+) (clpX) [Streptomyces sp. NBC_01568]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTCTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTAGCGGTCTACAACCACTACAAGCGGGTGCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCGGGCAAGACGCTGCTCGCGCAGA
CGCTCGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACGACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGTTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCCGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGATGGTGT
GGAGCTGGACTTCGAGCGCGGGGCGCTTGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCGGACGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516