Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHA20_RS25915 Genome accession   NZ_CP109344
Coordinates   5658751..5659875 (-) Length   374 a.a.
NCBI ID   WP_030972387.1    Uniprot ID   A0ABV2U8C8
Organism   Streptomyces sp. NBC_01579     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5653751..5664875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA20_RS25895 (OHA20_25945) - 5654524..5655135 (-) 612 WP_330245150.1 hypothetical protein -
  OHA20_RS25900 (OHA20_25950) - 5655204..5655854 (-) 651 WP_330245149.1 SigE family RNA polymerase sigma factor -
  OHA20_RS25905 (OHA20_25955) - 5656030..5656932 (-) 903 WP_326629355.1 A/G-specific adenine glycosylase -
  OHA20_RS25910 (OHA20_25960) - 5657787..5658596 (+) 810 WP_406363323.1 hypothetical protein -
  OHA20_RS25915 (OHA20_25965) disA 5658751..5659875 (-) 1125 WP_030972387.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA20_RS25920 (OHA20_25970) radA/sms 5659956..5661368 (-) 1413 WP_389123557.1 DNA repair protein RadA Machinery gene
  OHA20_RS25925 (OHA20_25975) - 5661619..5663403 (+) 1785 WP_355226967.1 BACON domain-containing protein -
  OHA20_RS25930 (OHA20_25980) - 5663435..5664304 (-) 870 WP_267004539.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40389.30 Da        Isoelectric Point: 4.8644

>NTDB_id=674585 OHA20_RS25915 WP_030972387.1 5658751..5659875(-) (disA) [Streptomyces sp. NBC_01579]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=674585 OHA20_RS25915 WP_030972387.1 5658751..5659875(-) (disA) [Streptomyces sp. NBC_01579]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATTCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCATCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGTGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCGCAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATATGTGGTGGAACTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAGCTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
AGCGCTGACCGAGCTGGACGGGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAGACCCTCGACTCGGCCGTCTCGCCCCGCGGTTTCCGGTTGCTGGCGAAGGTGCCGCGACTCCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCTCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTTGAGCGGTACG
TGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433