Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG278_RS20275 Genome accession   NZ_CP109337
Coordinates   4532635..4533759 (-) Length   374 a.a.
NCBI ID   WP_328329764.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00455     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4527635..4538759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG278_RS20245 (OG278_20270) cseB 4527641..4528339 (-) 699 WP_328329755.1 two-component system response regulator CseB -
  OG278_RS20250 (OG278_20275) - 4528352..4528975 (-) 624 WP_328329757.1 hypothetical protein -
  OG278_RS20255 (OG278_20280) - 4529092..4529643 (-) 552 WP_266854649.1 SigE family RNA polymerase sigma factor -
  OG278_RS20260 (OG278_20285) - 4529819..4530874 (-) 1056 WP_328329760.1 A/G-specific adenine glycosylase -
  OG278_RS20265 (OG278_20290) - 4530891..4531499 (-) 609 WP_328329762.1 phosphatase PAP2 family protein -
  OG278_RS20270 (OG278_20295) - 4531683..4532531 (+) 849 WP_328335557.1 hypothetical protein -
  OG278_RS20275 (OG278_20300) disA 4532635..4533759 (-) 1125 WP_328329764.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG278_RS20280 (OG278_20305) radA/sms 4533816..4535213 (-) 1398 WP_328329767.1 DNA repair protein RadA Machinery gene
  OG278_RS20285 (OG278_20310) - 4535396..4537102 (+) 1707 WP_328329769.1 hypothetical protein -
  OG278_RS20290 (OG278_20315) - 4537166..4537996 (-) 831 WP_328329771.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40272.15 Da        Isoelectric Point: 5.0132

>NTDB_id=674501 OG278_RS20275 WP_328329764.1 4532635..4533759(-) (disA) [Streptomyces sp. NBC_00455]
MAANDRAAPGRSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVTEALVDLNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=674501 OG278_RS20275 WP_328329764.1 4532635..4533759(-) (disA) [Streptomyces sp. NBC_00455]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAGATCCGGCGGGAGCTCGTCCGGCAATGAAGCGCTGATGCGTGCCACGCT
GAGCGCTGTCGCGCCCGGTACCGCGCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGGAACACCGGCGGCCTCATCGTCC
TGGGCATGGACAAGAGCGTCGAAGCGATGTGCACCGGCGGTTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTGCGG
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTGACCAAGATTCTCCGGGCCGGCGTCCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCGGCTTCCCCG
TCGTCTCCGTATCGCAGTCGATGCACCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTGACGGCGGTCGCGCAGCGTCTTGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCC
GGGGTCGAGCCCGAGCGGGAGCTGGTGGTCAGAGACTATGTGCCGGAGCCGACGGCGAAGCGTTCGCGCACGGTCACCGA
GGCACTGGTCGACCTCAACACGCTCAGCCACACGGAGCTGCTCGAACTTCCCGTGGTGGCAAGGGCGTTGGGATACAGCG
GCTCCCCGGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCCAAGGTGCCGAGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCTGCGAGCGTGGACGATCTGCAGGCGGTGGA
CGGGGTCGGGGAGGCGCGGGCCCGCAGCGTCCGGGAGGGGCTTTCGCGGCTCGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.045

94.652

0.436