Detailed information NTG0674482

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG278_RS10810
• Genome accession: NZ_CP109337
• Coordinates: 2448040..2449332 (-)
• Length: 430 a.a.
• NCBI ID: WP_266857025.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00455
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2443040..2454332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG278_RS10795 (OG278_10805)	-	2443066..2444079 (+)	1014	WP_328326539.1	rod shape-determining protein	-
OG278_RS10800 (OG278_10810)	-	2444146..2446767 (-)	2622	WP_328326541.1	valine--tRNA ligase	-
OG278_RS10805 (OG278_10815)	-	2446905..2447930 (+)	1026	WP_328326543.1	hypothetical protein	-
OG278_RS10810 (OG278_10820)	clpX	2448040..2449332 (-)	1293	WP_266857025.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG278_RS10815 (OG278_10825)	clpP	2449489..2450172 (-)	684	WP_164261167.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG278_RS10820 (OG278_10830)	clpP	2450224..2450841 (-)	618	WP_323183829.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG278_RS10825 (OG278_10835)	tig	2451124..2452515 (-)	1392	WP_328326547.1	trigger factor	-
OG278_RS10840 (OG278_10850)	-	2453126..2453320 (-)	195	WP_164261160.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47072.85 Da
• Isoelectric Point: 4.7809

>NTDB_id=674482 OG278_RS10810 WP_266857025.1 2448040..2449332(-) (clpX) [Streptomyces sp. NBC_00455]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=674482 OG278_RS10810 WP_266857025.1 2448040..2449332(-) (clpX) [Streptomyces sp. NBC_00455]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAACCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGCGCCAGCCG
CGAGGACGCGATCGAACTCGCCAAGTCCAATATCCTGTTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCCCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACCGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCTTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTTGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACCATCCGCTCCAAGAGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGATCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTTCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCCGCGCTTGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGTCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGATGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAACGACGGGCGTCACGA
GAAGTCCGCCTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.772	93.721	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512