Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA59_RS19840 Genome accession   NZ_CP109333
Coordinates   4278751..4279875 (+) Length   374 a.a.
NCBI ID   WP_030972387.1    Uniprot ID   A0ABV2U8C8
Organism   Streptomyces sp. NBC_01589     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4273751..4284875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA59_RS19825 (OHA59_19855) - 4274342..4275211 (+) 870 WP_267004539.1 hypothetical protein -
  OHA59_RS19830 (OHA59_19860) - 4275243..4277018 (-) 1776 WP_406427963.1 BACON domain-containing protein -
  OHA59_RS19835 (OHA59_19865) radA/sms 4277258..4278670 (+) 1413 WP_406427964.1 DNA repair protein RadA Machinery gene
  OHA59_RS19840 (OHA59_19870) disA 4278751..4279875 (+) 1125 WP_030972387.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA59_RS19845 (OHA59_19875) - 4280024..4280833 (-) 810 WP_406427965.1 hypothetical protein -
  OHA59_RS19850 (OHA59_19880) - 4281683..4282585 (+) 903 WP_313937908.1 A/G-specific adenine glycosylase -
  OHA59_RS19855 (OHA59_19885) - 4282761..4283411 (+) 651 WP_406427967.1 SigE family RNA polymerase sigma factor -
  OHA59_RS19860 (OHA59_19890) - 4283399..4284091 (+) 693 WP_383925028.1 hypothetical protein -
  OHA59_RS19865 (OHA59_19895) cseB 4284171..4284875 (+) 705 WP_267004530.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40389.30 Da        Isoelectric Point: 4.8644

>NTDB_id=674413 OHA59_RS19840 WP_030972387.1 4278751..4279875(+) (disA) [Streptomyces sp. NBC_01589]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=674413 OHA59_RS19840 WP_030972387.1 4278751..4279875(+) (disA) [Streptomyces sp. NBC_01589]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGCCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGTGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCACAACGCCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATATGTGGTGGAACTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAGCTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
AGCGCTGACCGAGCTGGACGGGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTGGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGTTTCCGGTTGCTGGCGAAGGTGCCGCGGCTCCCCGGAGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTTGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433