Detailed information NTG0674249

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG978_RS14200
• Genome accession: NZ_CP109327
• Coordinates: 3046826..3048124 (-)
• Length: 432 a.a.
• NCBI ID: WP_326765577.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01591
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3041826..3053124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG978_RS14190 (OG978_14195)	-	3042364..3045012 (-)	2649	WP_326765575.1	valine--tRNA ligase	-
OG978_RS14195 (OG978_14200)	-	3045153..3046187 (+)	1035	WP_326765576.1	hypothetical protein	-
OG978_RS14200 (OG978_14205)	clpX	3046826..3048124 (-)	1299	WP_326765577.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG978_RS14205 (OG978_14210)	clpP	3048282..3048962 (-)	681	WP_093898221.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG978_RS14210 (OG978_14215)	-	3049043..3049648 (-)	606	WP_326770031.1	ATP-dependent Clp protease proteolytic subunit	-
OG978_RS14215 (OG978_14220)	tig	3049914..3051320 (-)	1407	WP_326765578.1	trigger factor	-
OG978_RS14230 (OG978_14235)	-	3051970..3052164 (-)	195	WP_266419258.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47246.02 Da
• Isoelectric Point: 4.8306

>NTDB_id=674249 OG978_RS14200 WP_326765577.1 3046826..3048124(-) (clpX) [Streptomyces sp. NBC_01591]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPSLEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=674249 OG978_RS14200 WP_326765577.1 3046826..3048124(-) (clpX) [Streptomyces sp. NBC_01591]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGTGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCCATCGAACTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGTTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCGTTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGCCCGTCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTCCGCGACAACGTGAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.056	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509