Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MUO46_RS03330 Genome accession   NZ_CP094927
Coordinates   679855..680541 (-) Length   228 a.a.
NCBI ID   WP_072353822.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 13     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 674855..685541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUO46_RS03310 (MUO46_03290) rpsT 675769..676020 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  MUO46_RS03315 (MUO46_03295) holA 676065..677039 (-) 975 WP_001282562.1 DNA polymerase III subunit delta -
  MUO46_RS03320 (MUO46_03300) comEC 677096..679297 (-) 2202 WP_001815444.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MUO46_RS03325 (MUO46_03305) - 679302..679763 (-) 462 WP_000439693.1 ComE operon protein 2 -
  MUO46_RS03330 (MUO46_03310) comEA 679855..680541 (-) 687 WP_072353822.1 ComEA family DNA-binding protein Machinery gene
  MUO46_RS03335 (MUO46_03315) - 680581..681297 (-) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  MUO46_RS03340 (MUO46_03320) rsfS 681300..681653 (-) 354 WP_001088020.1 ribosome silencing factor -
  MUO46_RS03345 (MUO46_03325) yqeK 681654..682238 (-) 585 WP_001019320.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUO46_RS03350 (MUO46_03330) nadD 682228..682797 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUO46_RS03355 (MUO46_03335) yhbY 682800..683090 (-) 291 WP_000955231.1 ribosome assembly RNA-binding protein YhbY -
  MUO46_RS03360 (MUO46_03340) aroE 683094..683900 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  MUO46_RS03365 (MUO46_03345) yqeH 683914..685014 (-) 1101 WP_277445849.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.50 Da        Isoelectric Point: 9.6753

>NTDB_id=674151 MUO46_RS03330 WP_072353822.1 679855..680541(-) (comEA) [Staphylococcus aureus strain 13]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=674151 MUO46_RS03330 WP_072353822.1 679855..680541(-) (comEA) [Staphylococcus aureus strain 13]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.561

100

0.996
  comEA Staphylococcus aureus N315

97.807

100

0.978