Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MUO48_RS13990 Genome accession   NZ_CP094925
Coordinates   2808867..2809853 (+) Length   328 a.a.
NCBI ID   WP_000959292.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 15     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2803867..2814853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUO48_RS13965 (MUO48_13955) opp4B 2804081..2805043 (+) 963 WP_024273409.1 oligopeptide ABC transporter permease -
  MUO48_RS13970 (MUO48_13960) opp4C 2805055..2805936 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  MUO48_RS13975 (MUO48_13965) trpS 2805978..2806967 (-) 990 WP_000448943.1 tryptophan--tRNA ligase -
  MUO48_RS13980 (MUO48_13970) spxA 2807261..2807656 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  MUO48_RS13985 (MUO48_13975) mecA 2808027..2808746 (+) 720 WP_001217728.1 adaptor protein MecA -
  MUO48_RS13990 (MUO48_13980) coiA 2808867..2809853 (+) 987 WP_000959292.1 competence protein CoiA family protein Machinery gene
  MUO48_RS13995 (MUO48_13985) pepF 2809901..2811709 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  MUO48_RS14000 (MUO48_13990) - 2812189..2813508 (-) 1320 WP_001808146.1 ISL3-like element IS1181 family transposase -
  MUO48_RS14005 (MUO48_13995) yjbH 2813690..2814496 (-) 807 WP_000896697.1 protease adaptor protein YjbH -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38884.55 Da        Isoelectric Point: 9.7683

>NTDB_id=674095 MUO48_RS13990 WP_000959292.1 2808867..2809853(+) (coiA) [Staphylococcus aureus strain 15]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGFKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDK
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=674095 MUO48_RS13990 WP_000959292.1 2808867..2809853(+) (coiA) [Staphylococcus aureus strain 15]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATTTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAAA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

99.39

100

0.994
  coiA Staphylococcus aureus N315

97.561

100

0.976