Detailed information NTG0067408

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: BTUAT1_RS16350
• Genome accession: NZ_AP014928
• Coordinates: 3201889..3203268 (-)
• Length: 459 a.a.
• NCBI ID: WP_155641181.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain TUAT1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3196889..3208268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTUAT1_RS16315 (BTUAT1_32480)	flgL	3197072..3197983 (-)	912	WP_017368141.1	flagellar hook-associated protein FlgL	-
BTUAT1_RS16320 (BTUAT1_32490)	flgK	3197992..3199512 (-)	1521	WP_017368142.1	flagellar hook-associated protein FlgK	-
BTUAT1_RS16325 (BTUAT1_32500)	-	3199528..3200010 (-)	483	WP_007499977.1	flagellar protein FlgN	-
BTUAT1_RS16330 (BTUAT1_32510)	flgM	3200029..3200292 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
BTUAT1_RS16335 (BTUAT1_32520)	-	3200372..3200791 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
BTUAT1_RS16340 (BTUAT1_32530)	-	3200848..3201570 (-)	723	WP_231947217.1	ComF family protein	-
BTUAT1_RS16345 (BTUAT1_32540)	-	3201531..3201824 (-)	294	WP_035701582.1	late competence development ComFB family protein	-
BTUAT1_RS16350 (BTUAT1_32550)	comFA	3201889..3203268 (-)	1380	WP_155641181.1	DEAD/DEAH box helicase	Machinery gene
BTUAT1_RS16355 (BTUAT1_32560)	-	3203388..3204230 (-)	843	WP_060832692.1	DegV family protein	-
BTUAT1_RS16360 (BTUAT1_32570)	degU	3204442..3205131 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BTUAT1_RS16365 (BTUAT1_32580)	degS	3205196..3206371 (-)	1176	WP_035389673.1	sensor histidine kinase	Regulator
BTUAT1_RS16370 (BTUAT1_32590)	-	3206593..3207261 (+)	669	WP_017357860.1	YigZ family protein	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 52415.11 Da
• Isoelectric Point: 9.9083

>NTDB_id=67408 BTUAT1_RS16350 WP_155641181.1 3201889..3203268(-) (comFA) [Bacillus altitudinis strain TUAT1]
MNLEKAMELSHKLQSRHLLPIECQCTQSELEWLENQGFIHRTPAVDRVAGGLICCRCGVSNKRYFALSPCETCKKDCVYC
RSCIMLGKVSECGFLYEWTGPQKKETRQVELTWQGELSKGQKRASDRLVEAIQNKFDLLVWAVCGAGKTEVLFHGIKYAL
NNGMSVCIATPRTDVVLELEPRMRKAFQGVNIAVLYGGSSQRFQMAPLMIATTHQLMRYKNAFDVLIVDEVDAFPYSMDE
RLQFAVLKSMKKTGVRIYLSATPSKKMQKDVARGQLEAIKIPLRFHQKPLPVPTFQWVGDWKKKLKRNRLPASTMNWLHE
HITKKKRVLLFVPSISTMKKVTHILQVQCVNVQGVSADDQERKQKVQHFRDHRYDVLVTTTILERGVTIQDVQVGVLGAE
SPIFTESALVQISGRAGRHPDFFNGDVYFFHFGLTRSMKQAKKHIVKMNNTAEKEFSEK

Nucleotide

• Length: 1380 bp

>NTDB_id=67408 BTUAT1_RS16350 WP_155641181.1 3201889..3203268(-) (comFA) [Bacillus altitudinis strain TUAT1]
TTGAATCTGGAAAAAGCAATGGAACTCAGTCACAAGCTACAATCAAGGCATCTTCTTCCTATTGAATGTCAATGTACACA
GTCCGAATTGGAGTGGCTGGAGAATCAAGGATTCATCCATAGAACACCTGCTGTCGATAGGGTGGCGGGTGGTTTGATCT
GCTGCCGGTGCGGTGTATCAAACAAGCGCTACTTTGCCCTCTCTCCGTGTGAAACATGTAAAAAAGACTGTGTATACTGT
AGGTCCTGCATCATGCTGGGAAAAGTAAGTGAATGTGGCTTTCTCTATGAATGGACGGGTCCACAAAAGAAAGAAACAAG
ACAAGTTGAATTAACATGGCAGGGAGAGCTTTCTAAAGGGCAAAAGAGAGCGTCCGATAGACTAGTAGAAGCAATCCAAA
ACAAATTTGATCTGCTCGTTTGGGCTGTTTGTGGTGCGGGGAAAACGGAGGTGCTTTTTCACGGAATAAAATATGCGTTA
AATAACGGAATGAGTGTTTGTATTGCGACGCCTAGAACCGATGTTGTACTTGAGCTCGAACCTCGAATGAGGAAGGCATT
TCAAGGAGTGAATATAGCTGTACTTTATGGCGGGAGTTCTCAAAGATTTCAAATGGCACCGCTTATGATCGCTACAACCC
ATCAGCTAATGAGATATAAAAACGCTTTTGATGTCCTCATTGTAGACGAAGTCGATGCTTTTCCTTATTCAATGGATGAA
CGGCTTCAGTTTGCTGTTTTAAAGTCAATGAAAAAAACAGGAGTTAGAATTTACTTAAGTGCCACACCATCTAAAAAAAT
GCAAAAGGATGTTGCTCGTGGACAATTAGAAGCGATCAAAATTCCTCTGCGCTTCCACCAAAAACCGTTGCCTGTCCCAA
CATTTCAATGGGTTGGAGATTGGAAAAAGAAATTAAAAAGAAATCGGCTTCCAGCATCTACAATGAACTGGCTGCATGAA
CATATCACAAAGAAAAAAAGAGTGTTACTCTTTGTTCCTTCTATTTCTACTATGAAGAAGGTAACTCATATTCTTCAAGT
TCAATGTGTAAATGTACAGGGAGTTTCTGCCGATGATCAAGAAAGGAAGCAAAAAGTCCAGCATTTCAGAGATCATAGAT
ACGATGTATTGGTTACAACAACTATTCTAGAAAGAGGCGTTACCATTCAAGATGTTCAAGTGGGCGTATTAGGTGCGGAA
TCTCCTATTTTTACAGAAAGTGCACTTGTCCAAATTTCTGGTAGAGCAGGGAGACATCCAGATTTTTTTAATGGAGACGT
GTACTTTTTTCATTTTGGTTTAACGAGAAGTATGAAACAAGCAAAGAAACATATCGTAAAAATGAATAATACAGCTGAAA
AAGAGTTTTCTGAAAAATAG

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (320-419)

• Type III restriction enzyme, res subunit (ResIII) (116-264)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.125	97.386	0.508
comFA/cflA	Streptococcus mitis NCTC 12261	38.928	93.464	0.364
comFA/cflA	Streptococcus pneumoniae Rx1	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae D39	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae R6	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae TIGR4	38.515	93.9	0.362