Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG846_RS16900 Genome accession   NZ_CP109314
Coordinates   3655108..3656232 (-) Length   374 a.a.
NCBI ID   WP_161147461.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01601     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3650108..3661232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG846_RS16875 (OG846_16895) cseB 3650873..3651577 (-) 705 WP_329013487.1 two-component system response regulator CseB -
  OG846_RS16880 (OG846_16900) - 3651614..3652219 (-) 606 WP_329013489.1 hypothetical protein -
  OG846_RS16885 (OG846_16905) - 3652255..3652794 (-) 540 WP_217465152.1 SigE family RNA polymerase sigma factor -
  OG846_RS16890 (OG846_16910) - 3653078..3653953 (-) 876 WP_217465153.1 A/G-specific adenine glycosylase -
  OG846_RS16895 (OG846_16915) - 3654135..3654962 (+) 828 WP_329013492.1 hypothetical protein -
  OG846_RS16900 (OG846_16920) disA 3655108..3656232 (-) 1125 WP_161147461.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG846_RS16905 (OG846_16925) radA/sms 3656313..3657722 (-) 1410 WP_329013495.1 DNA repair protein RadA Machinery gene
  OG846_RS16910 (OG846_16930) - 3657966..3659678 (+) 1713 WP_329013497.1 hypothetical protein -
  OG846_RS16915 (OG846_16935) - 3659686..3660504 (-) 819 WP_329013500.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40143.95 Da        Isoelectric Point: 4.9235

>NTDB_id=674029 OG846_RS16900 WP_161147461.1 3655108..3656232(-) (disA) [Streptomyces sp. NBC_01601]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTPLRDGLERVLRGNTGGLILLGWDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALFELDALSHAELLELGTVARGMGYTASPESLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=674029 OG846_RS16900 WP_161147461.1 3655108..3656232(-) (disA) [Streptomyces sp. NBC_01601]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCTCT
GAGTGCCGTGGCTCCGGGCACCCCCCTGCGCGACGGTCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGCCTGATCCTGC
TCGGCTGGGACAAGACGGTCGAGGCGATGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCCTCGGACCTGTCGAAGATCCTGCGCGCCGGGGTCCAGCTCGTCCC
CGACCCGACCATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGCGTCTCCAAGCAGGTCGGCTTCCCCG
TGGTCTCGGTGTCCCAGTCGATGCGGCTGATCGCGCTGTACGTCGACGGTCAGCGCCGGGTGCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTCGCGCAGCGCCTGGAGATGGTCCGGCGCATCG
CCACCGAGATCGCGGAGTACGTGGTCGAGCTGGGTACGGACGGCCGCCTGCTGGCGCTCCAGTTGGAGGAGCTGATCGCG
GGCGTCGAGCCCGACCGTGAGCTGGTCGTCCGGGACTATGTGCCCGAGCCGACCGCGAAGCGCTCGCGCACGGTGGAGGA
GGCGCTGTTCGAGCTGGACGCGCTGAGCCATGCGGAGCTGCTCGAACTGGGCACGGTGGCGCGGGGGATGGGGTACACCG
CGTCTCCCGAGTCGCTGGACTCGGCGGTGTCGCCGCGCGGGTTCCGGCTGCTGGCGAAGGTGCCCCGGCTGCCCGGTGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGTGGTCTGCAGAAGCTGCTCGCCGCCAGCGTGGATGATCTTCAGACCGTGGA
CGGGGTCGGGGAGGCCCGGGCTCGTAGCGTGCGGGAAGGGCTCTCGCGGCTGGCGGAGTCTTCCATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441