Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   lgb_RS02035 Genome accession   NZ_CP094882
Coordinates   418603..419286 (+) Length   227 a.a.
NCBI ID   WP_019292408.1    Uniprot ID   A0A139MDU9
Organism   Lactococcus petauri strain B1726     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 413603..424286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  lgb_RS02025 (lgb_00399) rpoC 413708..417355 (+) 3648 WP_019292410.1 DNA-directed RNA polymerase subunit beta' -
  lgb_RS02030 (lgb_00400) - 417448..418356 (-) 909 WP_019293601.1 diacylglycerol/lipid kinase family protein -
  lgb_RS02035 (lgb_00401) mecA 418603..419286 (+) 684 WP_019292408.1 adaptor protein MecA Regulator
  lgb_RS02040 (lgb_00402) - 419290..420546 (+) 1257 WP_019293600.1 glycosyltransferase family 4 protein -
  lgb_RS02045 (lgb_00403) sufC 420624..421394 (+) 771 WP_017368843.1 Fe-S cluster assembly ATPase SufC -
  lgb_RS02050 (lgb_00404) sufD 421466..422722 (+) 1257 WP_019293599.1 Fe-S cluster assembly protein SufD -
  lgb_RS02055 (lgb_00405) - 422722..423933 (+) 1212 WP_019292404.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26254.39 Da        Isoelectric Point: 4.0031

>NTDB_id=673934 lgb_RS02035 WP_019292408.1 418603..419286(+) (mecA) [Lactococcus petauri strain B1726]
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGTMADTSTTETKETKVENKPDPDFVFYSLEFENMSQLLTAVKNVKIDAE
ESELYSYEDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETINSRETLQEYGEILINTRALEVLSKI

Nucleotide


Download         Length: 684 bp        

>NTDB_id=673934 lgb_RS02035 WP_019292408.1 418603..419286(+) (mecA) [Lactococcus petauri strain B1726]
ATGCAATACGAAGAAATAAACGAAAAAACGATAAAGATTAGCCTAACCTTTCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACAAATCAGTCAATGGTTGAAAATCTTTTTTATGAATTAGTAGAAGAACTAGGACTTGAGGAAAGGT
TCTCATCAGGACTTTTAACTTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATTATTGTTACTGAAGAAAATATTGAT
ATTGATCCCAATAATCTCCCAGATGATCCCGAAGAATTTGAGCAGCTTATGACGGATTTCTTTGGACGTGTGGAAGATTT
AAAACAAAATGGCGGAACAATGGCAGATACAAGTACAACTGAAACAAAAGAAACAAAAGTAGAAAATAAACCAGATCCAG
ATTTTGTCTTCTATTCTCTAGAATTTGAAAACATGTCTCAACTTTTAACAGCAGTAAAAAATGTTAAAATTGATGCAGAG
GAATCTGAACTTTATAGCTATGAAGATAAGTTTTATTTGATTATTTTGGACAATCAAAAGTCAAAAGGAAAGACAGCCGT
AAGTTCGATGCGTGCCCGAATGTTAGAATACGGACAGGAAACGATCAACAGTCGCGAAACACTACAAGAATACGGCGAGA
TACTAATCAATACACGTGCTTTGGAAGTTCTCTCAAAAATTTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139MDU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

54.077

100

0.555
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

54.077

100

0.555