Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA21_RS08195 Genome accession   NZ_CP094825
Coordinates   1646833..1647876 (-) Length   347 a.a.
NCBI ID   WP_046207953.1    Uniprot ID   A0A9Q2L749
Organism   Staphylococcus ureilyticus strain IVB6236     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1641833..1652876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA21_RS08165 (MUA21_08135) - 1642407..1643645 (-) 1239 WP_107525762.1 aminopeptidase -
  MUA21_RS08170 (MUA21_08140) - 1643660..1643863 (-) 204 WP_046207949.1 DUF1128 family protein -
  MUA21_RS08175 (MUA21_08145) - 1643996..1644460 (+) 465 WP_046207950.1 low molecular weight protein-tyrosine-phosphatase -
  MUA21_RS08180 (MUA21_08150) - 1644468..1644752 (+) 285 WP_262561046.1 YtxH domain-containing protein -
  MUA21_RS08185 (MUA21_08155) - 1645056..1646144 (+) 1089 WP_262561047.1 YihY/virulence factor BrkB family protein -
  MUA21_RS08190 (MUA21_08160) vraR 1646214..1646843 (-) 630 WP_019469616.1 response regulator transcription factor Regulator
  MUA21_RS08195 (MUA21_08165) vraS 1646833..1647876 (-) 1044 WP_046207953.1 sensor histidine kinase Regulator
  MUA21_RS08200 (MUA21_08170) liaF 1647873..1648574 (-) 702 WP_073345877.1 cell wall-active antibiotics response protein LiaF -
  MUA21_RS08205 (MUA21_08175) - 1648591..1648977 (-) 387 WP_019469613.1 hypothetical protein -
  MUA21_RS08210 (MUA21_08180) map 1649082..1649834 (-) 753 WP_107525763.1 type I methionyl aminopeptidase -
  MUA21_RS08215 (MUA21_08185) - 1650011..1650997 (+) 987 WP_064209717.1 aromatic acid exporter family protein -
  MUA21_RS08220 (MUA21_08190) - 1651082..1651807 (-) 726 WP_046207957.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39974.35 Da        Isoelectric Point: 5.8518

>NTDB_id=673490 MUA21_RS08195 WP_046207953.1 1646833..1647876(-) (vraS) [Staphylococcus ureilyticus strain IVB6236]
MNHYIRAIGSMLILVYSTFFAMFFIDKVFVNIIYFQGMIYTQIFGIPVLLFINLLVILLCIIVGSVLAYKINQQNHWLQD
QIERSIEGQTVGINDQNIELYNETIELYQTLVPLNQEVHKLRLKTQNLTNESYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETDLKAPLDQQIPVLEKMVQDSQLEMRALLLHLRPIGLKDKSLGQGIKDLVVDLQKKVPMKVVHDI
EDFDVPKGIEDHLFRITQEAISNTLRHSKGTKVTIELFNREEYLLLRIQDDGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYAD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=673490 MUA21_RS08195 WP_046207953.1 1646833..1647876(-) (vraS) [Staphylococcus ureilyticus strain IVB6236]
ATGAATCACTATATAAGAGCAATAGGGTCGATGTTGATATTAGTTTATAGTACATTTTTCGCTATGTTTTTTATAGATAA
AGTATTTGTGAATATTATATATTTTCAAGGTATGATTTATACACAAATCTTTGGTATTCCAGTTTTACTATTTATTAATT
TATTAGTTATATTACTATGCATCATAGTTGGCTCAGTATTAGCATATAAAATCAACCAACAAAATCATTGGTTACAAGAT
CAAATTGAACGTTCTATTGAAGGACAAACAGTTGGTATCAACGACCAGAATATAGAATTATATAATGAAACAATTGAATT
ATATCAAACACTTGTACCGCTCAATCAAGAAGTTCATAAATTACGTTTAAAAACACAAAATTTAACGAATGAATCATATA
ATATGAACGATGTGAAAGTTAAAAAAATAATTGAAGATGAAAGGCAAAGACTGGCTCGTGAGTTACATGATTCCGTAAGC
CAGCAACTATTTGCAGCAAGCATGATGCTCTCTGCTATTAAAGAAACTGATTTGAAAGCACCTTTAGATCAACAAATTCC
AGTATTGGAAAAAATGGTCCAAGATTCACAATTAGAAATGCGCGCCTTGCTATTACATTTAAGACCAATTGGCTTGAAGG
ATAAATCACTTGGTCAAGGTATCAAAGATTTAGTAGTTGATCTACAGAAAAAAGTGCCAATGAAAGTCGTACATGATATT
GAAGATTTCGACGTTCCTAAAGGCATTGAAGATCATTTGTTTAGAATTACACAAGAAGCAATTTCAAATACATTAAGACA
TTCAAAAGGTACAAAAGTTACAATTGAATTGTTTAATAGAGAGGAATATTTATTATTACGTATACAAGATGATGGTAAAG
GCTTTAACGTTGATGATAAGGTAGAACAAAGCTATGGGTTAAAAAATATGCGTGAACGAGCACTTGAAATTGGCGCAACA
TTTCATATAGTATCACTGCCAGATTCAGGAACACGGATTGAAGTCAAAGCCCCATTAAATAAGGAGGATTCGTATGCCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

87.32

100

0.873