Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGA   Type   Machinery gene
Locus tag   MUA21_RS06480 Genome accession   NZ_CP094825
Coordinates   1319328..1320302 (-) Length   324 a.a.
NCBI ID   WP_064208910.1    Uniprot ID   -
Organism   Staphylococcus ureilyticus strain IVB6236     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1314328..1325302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA21_RS06445 (MUA21_06415) gcvT 1314890..1315981 (-) 1092 WP_107526325.1 glycine cleavage system aminomethyltransferase GcvT -
  MUA21_RS06450 (MUA21_06420) - 1316138..1316662 (-) 525 WP_046208175.1 shikimate kinase -
  MUA21_RS06455 (MUA21_06425) - 1316827..1317270 (-) 444 WP_336606224.1 ComGF family competence protein -
  MUA21_RS06460 (MUA21_06430) - 1317248..1317541 (-) 294 WP_046208172.1 hypothetical protein -
  MUA21_RS06465 (MUA21_06435) comGD 1317522..1317962 (-) 441 WP_103161487.1 competence type IV pilus minor pilin ComGD -
  MUA21_RS06470 (MUA21_06440) comGC 1317952..1318260 (-) 309 WP_164987268.1 competence type IV pilus major pilin ComGC Machinery gene
  MUA21_RS06475 (MUA21_06445) comGB 1318289..1319356 (-) 1068 WP_262562207.1 competence type IV pilus assembly protein ComGB -
  MUA21_RS06480 (MUA21_06450) comGA 1319328..1320302 (-) 975 WP_064208910.1 competence type IV pilus ATPase ComGA Machinery gene
  MUA21_RS06485 (MUA21_06455) - 1320362..1320985 (-) 624 WP_046208168.1 MBL fold metallo-hydrolase -
  MUA21_RS06490 (MUA21_06460) - 1320988..1321311 (-) 324 WP_064208909.1 MTH1187 family thiamine-binding protein -
  MUA21_RS06495 (MUA21_06465) - 1321311..1322297 (-) 987 WP_107526330.1 glucokinase -
  MUA21_RS06500 (MUA21_06470) - 1322604..1322804 (-) 201 WP_262562246.1 YqgQ family protein -
  MUA21_RS06505 (MUA21_06475) - 1322794..1324245 (-) 1452 WP_204180127.1 rhomboid family intramembrane serine protease -
  MUA21_RS06510 (MUA21_06480) - 1324257..1324799 (-) 543 WP_262562218.1 5-formyltetrahydrofolate cyclo-ligase -
  MUA21_RS06515 (MUA21_06485) rpmG 1324934..1325083 (-) 150 WP_019469354.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 324 a.a.        Molecular weight: 37079.23 Da        Isoelectric Point: 9.6682

>NTDB_id=673480 MUA21_RS06480 WP_064208910.1 1319328..1320302(-) (comGA) [Staphylococcus ureilyticus strain IVB6236]
MKLLFKNIIDKAIKENVSDVHFIPNHKKVYIKFRKKEYLNTIETIEVNIYRKLLTYMKYQAGLDVSTHSTAQSGRYAYKL
KQLYYLRVSTLPLSLGFESCVVRIIPQYFQSSAKALSINQLFKLVHKKQGLILFSGPTGSGKSTLMYQLIVHAKEKLNVN
IITVEDPVERLVEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIRDAMIAKQVIHASLSGHLVLSTIHSNNCKGAL
SRLLEMGISIQELRQTVLSIINQRLVNTSKDERSLIYEQLTREDIAFYFENQLTLPNTFKNLSYKLHEMAKEGEICEETL
NRYL

Nucleotide


Download         Length: 975 bp        

>NTDB_id=673480 MUA21_RS06480 WP_064208910.1 1319328..1320302(-) (comGA) [Staphylococcus ureilyticus strain IVB6236]
TTGAAGTTACTCTTTAAAAATATCATTGATAAAGCGATTAAGGAAAATGTATCAGATGTACACTTTATTCCAAACCACAA
AAAGGTATACATTAAATTTAGAAAAAAAGAATATTTAAACACTATAGAAACGATAGAAGTCAATATTTATAGGAAGTTGC
TCACATATATGAAATATCAAGCAGGTTTAGATGTATCAACACACAGCACCGCACAAAGTGGAAGATACGCTTACAAACTT
AAACAATTATACTATTTAAGAGTATCAACTTTACCTTTATCTCTTGGATTTGAAAGTTGCGTAGTGAGAATTATACCTCA
ATATTTTCAAAGTTCAGCAAAAGCACTTAGTATAAATCAATTATTTAAACTAGTCCATAAAAAACAAGGTTTAATACTGT
TTAGTGGACCTACTGGGTCTGGCAAAAGTACGTTAATGTATCAACTGATAGTGCACGCAAAGGAAAAATTAAATGTTAAT
ATAATTACTGTAGAAGACCCTGTAGAACGTTTGGTTGAAGGTATAACACAAGTTTCTATTAATGAAAAAGCAGGGATTAA
TTATGCTAATTCATTCAAGGCGATTTTAAGATGTGATCCAGATATTATACTTATTGGTGAAATCAGGGATGCTATGATTG
CTAAACAAGTTATTCATGCAAGTTTAAGTGGTCACTTAGTACTTTCAACGATACATTCAAATAATTGTAAGGGCGCATTG
AGTAGATTATTAGAAATGGGTATAAGTATTCAAGAACTACGACAGACGGTATTAAGTATTATCAATCAGAGATTAGTAAA
CACCTCAAAAGATGAACGTTCTTTAATTTATGAACAATTAACTCGAGAAGATATAGCATTTTATTTTGAAAATCAACTTA
CACTTCCAAACACATTCAAAAATTTGTCGTATAAATTGCATGAAATGGCAAAAGAAGGGGAAATTTGTGAAGAAACACTT
AATAGATATCTTTAG

Domains

Predicted by InterproScan.

Type II/IV secretion system protein (T2SSE)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGA Staphylococcus aureus MW2

59.259

100

0.593
  comGA Staphylococcus aureus N315

59.259

100

0.593