Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OH735_RS16285 Genome accession   NZ_CP109297
Coordinates   3479518..3480642 (+) Length   374 a.a.
NCBI ID   WP_406382262.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01618     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3474518..3485642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH735_RS16270 (OH735_16225) - 3474927..3475769 (+) 843 WP_406382259.1 hypothetical protein -
  OH735_RS16275 (OH735_16230) - 3475875..3477785 (-) 1911 WP_406382260.1 BACON domain-containing protein -
  OH735_RS16280 (OH735_16235) radA/sms 3478025..3479437 (+) 1413 WP_406382261.1 DNA repair protein RadA Machinery gene
  OH735_RS16285 (OH735_16240) disA 3479518..3480642 (+) 1125 WP_406382262.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OH735_RS16290 (OH735_16245) - 3480809..3481609 (-) 801 WP_406382264.1 hypothetical protein -
  OH735_RS16295 (OH735_16250) - 3481805..3482488 (+) 684 WP_406382265.1 phosphatase PAP2 family protein -
  OH735_RS16300 (OH735_16255) - 3482642..3483544 (+) 903 WP_406382266.1 A/G-specific adenine glycosylase -
  OH735_RS16305 (OH735_16260) - 3483718..3484368 (+) 651 WP_406382267.1 SigE family RNA polymerase sigma factor -
  OH735_RS16310 (OH735_16265) - 3484356..3485102 (+) 747 WP_406382268.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40379.30 Da        Isoelectric Point: 4.9372

>NTDB_id=673379 OH735_RS16285 WP_406382262.1 3479518..3480642(+) (disA) [Streptomyces sp. NBC_01618]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVTEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=673379 OH735_RS16285 WP_406382262.1 3479518..3480642(+) (disA) [Streptomyces sp. NBC_01618]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCGCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACGCGACTGCGT
GAGCTGGCGAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTGCAACTGGTCCC
GGATGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCCGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAATCAGGCACTCGCCACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
GGCGCTGGAGATCGAGGATCTGGTGACGGTCCGGGACGTGACGGCCGTCGCGCAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTGGAGTTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGCTCGACGAGTTGATCGCA
GGCGTCGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCACCGA
GGCGCTGACCGAACTCGACGCGCTCTCCCACACCGAACTGCTCGAACTCCCGGTCGTGGCAAGGGCGCTGGGGTACAGCG
GCTCGCCGGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCCAGCGTGGACGACCTCCAGACGGTCGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436