Detailed information NTG0673292

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: MUA42_RS06915
• Genome accession: NZ_CP094819
• Coordinates: 1373605..1373922 (+)
• Length: 105 a.a.
• NCBI ID: WP_262643335.1
• Uniprot ID: -
• Organism: Mammaliicoccus sciuri strain IVB6228
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1368605..1378922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA42_RS06890 (MUA42_06890)	-	1368920..1369552 (+)	633	WP_262643329.1	MBL fold metallo-hydrolase	-
MUA42_RS06895 (MUA42_06895)	-	1369686..1371038 (-)	1353	WP_262641434.1	IS1182 family transposase	-
MUA42_RS06900 (MUA42_06900)	-	1371255..1371503 (-)	249	WP_025904960.1	DUF2626 family protein	-
MUA42_RS06905 (MUA42_06905)	comGA	1371657..1372559 (+)	903	WP_262643331.1	competence type IV pilus ATPase ComGA	-
MUA42_RS06910 (MUA42_06910)	comGB	1372549..1373589 (+)	1041	WP_262643333.1	competence type IV pilus assembly protein ComGB	-
MUA42_RS06915 (MUA42_06915)	comGC	1373605..1373922 (+)	318	WP_262643335.1	competence type IV pilus major pilin ComGC	Machinery gene
MUA42_RS06920 (MUA42_06920)	-	1373951..1374349 (+)	399	WP_262644729.1	prepilin-type cleavage/methylation domain-containing protein	-
MUA42_RS06925 (MUA42_06925)	comGE	1374333..1374614 (+)	282	WP_025904955.1	competence type IV pilus minor pilin ComGE	-
MUA42_RS06930 (MUA42_06930)	comGF	1374589..1375023 (+)	435	WP_262643337.1	competence type IV pilus minor pilin ComGF	-
MUA42_RS06935 (MUA42_06935)	-	1375258..1375746 (+)	489	WP_262643339.1	shikimate kinase	-
MUA42_RS06940 (MUA42_06940)	gcvT	1375939..1377027 (+)	1089	WP_262643430.1	glycine cleavage system aminomethyltransferase GcvT	-
MUA42_RS06945 (MUA42_06945)	gcvPA	1377039..1378382 (+)	1344	WP_262643340.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11548.62 Da
• Isoelectric Point: 7.8546

>NTDB_id=673292 MUA42_RS06915 WP_262643335.1 1373605..1373922(+) (comGC) [Mammaliicoccus sciuri strain IVB6228]
MKIFKFLSKKEGFTLVEMLIVLLIISILLVIIIPNISKQSETVKSTGCQAQVKMVAGQVEAYTLKHDAKPNSINDLVSDG
YINQKQLTCKSGETITLENGEVVAH

Nucleotide

• Length: 318 bp

>NTDB_id=673292 MUA42_RS06915 WP_262643335.1 1373605..1373922(+) (comGC) [Mammaliicoccus sciuri strain IVB6228]
ATGAAAATATTTAAATTTTTAAGTAAAAAAGAAGGATTTACATTGGTTGAAATGTTAATTGTTCTTTTAATTATAAGTAT
ATTATTGGTGATCATCATACCAAACATAAGTAAGCAATCAGAGACGGTAAAAAGTACTGGCTGCCAAGCTCAAGTGAAGA
TGGTTGCTGGGCAAGTAGAAGCTTATACATTGAAGCACGATGCTAAACCAAATTCTATAAATGATTTAGTAAGTGATGGT
TATATTAATCAAAAGCAACTGACATGTAAATCAGGTGAAACAATTACACTTGAAAATGGTGAAGTTGTTGCACATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	64.078	98.095	0.629
comGC	Staphylococcus aureus MW2	64.078	98.095	0.629
comGC	Bacillus subtilis subsp. subtilis str. 168	47.312	88.571	0.419
comYC	Streptococcus mutans UA159	49.425	82.857	0.41
comYC	Streptococcus mutans UA140	49.425	82.857	0.41
comGC/cglC	Streptococcus mitis SK321	45.977	82.857	0.381
comGC/cglC	Streptococcus mitis NCTC 12261	45.977	82.857	0.381
comGC/cglC	Streptococcus pneumoniae TIGR4	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae D39	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae R6	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae Rx1	44.828	82.857	0.371
comGC	Lactococcus lactis subsp. cremoris KW2	46.914	77.143	0.362
comYC	Streptococcus suis isolate S10	48.718	74.286	0.362
comYC	Streptococcus gordonii str. Challis substr. CH1	50	72.381	0.362