Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OH768_RS29630 Genome accession   NZ_CP109293
Coordinates   6431640..6432764 (-) Length   374 a.a.
NCBI ID   WP_406458614.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01622     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6426640..6437764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH768_RS29605 (OH768_29550) cseB 6427257..6427961 (-) 705 WP_362982502.1 two-component system response regulator CseB -
  OH768_RS29610 (OH768_29555) - 6428118..6428777 (-) 660 WP_406458606.1 hypothetical protein -
  OH768_RS29615 (OH768_29560) - 6428765..6429304 (-) 540 WP_406458608.1 SigE family RNA polymerase sigma factor -
  OH768_RS29620 (OH768_29565) - 6429604..6430524 (-) 921 WP_406458610.1 A/G-specific adenine glycosylase -
  OH768_RS29625 (OH768_29570) - 6430808..6431623 (+) 816 WP_406458612.1 hypothetical protein -
  OH768_RS29630 (OH768_29575) disA 6431640..6432764 (-) 1125 WP_406458614.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OH768_RS29635 (OH768_29580) radA/sms 6432847..6434256 (-) 1410 WP_406458616.1 DNA repair protein RadA Machinery gene
  OH768_RS29640 (OH768_29585) - 6434454..6436154 (+) 1701 WP_406458618.1 BACON domain-containing protein -
  OH768_RS29645 (OH768_29590) - 6436159..6437025 (-) 867 WP_406458620.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39963.72 Da        Isoelectric Point: 4.9130

>NTDB_id=673227 OH768_RS29630 WP_406458614.1 6431640..6432764(-) (disA) [Streptomyces sp. NBC_01622]
MAANDRASAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGGDKTVEAMCTGGFILDVEFTATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIANEIAEYVLELGTDGRLLSLQLEELIA
GVDPERELVVRDYVPEPTAKRSRTVNEALAELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=673227 OH768_RS29630 WP_406458614.1 6431640..6432764(-) (disA) [Streptomyces sp. NBC_01622]
GTGGCAGCCAACGACCGGGCGTCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGCCTGGAGCGAATCCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCGGCGACAAGACCGTCGAAGCCATGTGCACAGGCGGTTTCATCCTGGACGTGGAGTTCACCGCCACCCGCCTACGA
GAACTCTGCAAGCTGGACGGCGGCATCGTGGTGTCGTCCGACCTCTCCAAGATCCTCAGAGCGGGCGTCCAACTGGTCCC
CGACCCCACGATCCCCACAGAAGAGACCGGCACCCGCCACCGCACAGCGGACCGCGTGAGCAAACAGGTCGGCTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGCCTGATCGCCCTCTACGTGGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAAGCACTCGCCACCCTGGAGCGCTACAAACTCCGCCTGGACGAGGTGGCGGGAACGCTGTC
GGCGTTGGAGATCGAAGACCTGGTAACGGTCAGGGACGTCTCAGCAGTGGTCCAACGCCTCGAAATGGTCCGCCTGATCG
CCAACGAAATCGCAGAGTACGTACTCGAACTGGGCACAGACGGCCGCCTCCTCTCCCTCCAACTCGAAGAGCTGATCGCG
GGCGTGGACCCGGAACGCGAACTGGTGGTCCGCGACTACGTCCCCGAACCCACGGCCAAACGCTCCCGCACGGTGAACGA
AGCACTGGCGGAACTCGACGCACTGTCCCACGCCGAACTCCTCGAACTCCCCACCGTGGCCCGCGCCTTGGGCTACACCG
GCTCCCCCGAGGCCCTCGACTCGGCGGTCTCCCCCCGAGGCTTCCGCCTCCTGGCCAAGGTCCCGCGCCTCCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGCGGCCTCCAAAAGCTCCTGGCGGCAAGCGTCGACGACCTTCAGACAGTCGA
CGGCGTAGGCGAGGCAAGGGCAAGAAGCGTACGAGAGGGCCTCTCCCGCCTGGCGGAGTCCTCAATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436