Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA52_RS04400 Genome accession   NZ_CP094814
Coordinates   933728..934771 (+) Length   347 a.a.
NCBI ID   WP_262619208.1    Uniprot ID   -
Organism   Staphylococcus agnetis strain IVB6175     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 928728..939771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA52_RS04370 (MUA52_04365) - 929239..929970 (+) 732 WP_037566938.1 type 1 glutamine amidotransferase -
  MUA52_RS04375 (MUA52_04370) - 930082..931107 (-) 1026 WP_105995642.1 aromatic acid exporter family protein -
  MUA52_RS04380 (MUA52_04375) - 931227..931601 (-) 375 WP_262619206.1 YkvA family protein -
  MUA52_RS04385 (MUA52_04380) map 931774..932532 (+) 759 WP_105995644.1 type I methionyl aminopeptidase -
  MUA52_RS04390 (MUA52_04385) - 932631..933017 (+) 387 WP_262619207.1 hypothetical protein -
  MUA52_RS04395 (MUA52_04390) liaF 933030..933731 (+) 702 WP_103345097.1 cell wall-active antibiotics response protein LiaF -
  MUA52_RS04400 (MUA52_04395) vraS 933728..934771 (+) 1044 WP_262619208.1 sensor histidine kinase Regulator
  MUA52_RS04405 (MUA52_04400) vraR 934761..935390 (+) 630 WP_037566926.1 response regulator transcription factor Regulator
  MUA52_RS04410 (MUA52_04405) - 935458..936027 (-) 570 WP_037566924.1 carbonic anhydrase -
  MUA52_RS04415 (MUA52_04410) - 936063..937334 (-) 1272 WP_037566922.1 YihY/virulence factor BrkB family protein -
  MUA52_RS04420 (MUA52_04415) - 937450..937725 (-) 276 WP_037566921.1 hypothetical protein -
  MUA52_RS04425 (MUA52_04420) - 937733..938191 (-) 459 WP_060551426.1 low molecular weight protein-tyrosine-phosphatase -
  MUA52_RS04430 (MUA52_04425) - 938324..938533 (+) 210 WP_037566916.1 DUF1128 domain-containing protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39946.01 Da        Isoelectric Point: 4.9468

>NTDB_id=673130 MUA52_RS04400 WP_262619208.1 933728..934771(+) (vraS) [Staphylococcus agnetis strain IVB6175]
MNQYVRSIGSMLILVYSLFTAFFFIDNVFTNIIFFQGMFYTQIFGIPVFLFLNLITIFLCIIVGSILAYKNNQQNDWLKV
QIERAIEGETVGVNDQQIEIYQETLELYEALVPLNQELHRMRIKTQNLTNESYNINDSKVQKIIEDERHRLARELHDSVS
QQLFAASMMLSAIKETPLEPPLNQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIQSLVTELKRKVPLKVVQDI
GEFDVPKGMEDHLFRITQEAISNTLRHSKGTEVTVELLQREDYILLRIQDDGIGFNVDDKMEQSYGLKNMRERAMEIGAT
FHIVSLPDSGTRIEVKAPLDKEGHNDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=673130 MUA52_RS04400 WP_262619208.1 933728..934771(+) (vraS) [Staphylococcus agnetis strain IVB6175]
ATGAATCAATACGTACGATCGATAGGTTCAATGCTTATTCTAGTGTATAGCTTATTTACAGCTTTCTTTTTTATAGACAA
TGTATTTACGAATATTATTTTCTTTCAAGGCATGTTTTATACACAAATTTTTGGTATACCTGTCTTTCTGTTTTTAAATC
TTATTACCATATTTTTGTGTATTATTGTTGGAAGTATACTTGCATATAAAAATAATCAACAAAATGATTGGCTTAAAGTT
CAAATTGAACGTGCGATTGAAGGGGAAACCGTTGGTGTAAATGATCAACAAATTGAAATTTACCAAGAAACACTAGAGCT
TTACGAAGCACTCGTGCCACTGAATCAAGAGTTACATCGCATGCGTATTAAAACGCAAAATTTAACGAATGAATCGTATA
ATATCAATGATTCAAAAGTACAAAAAATTATTGAGGATGAACGTCATCGACTTGCTAGAGAACTTCATGACAGTGTGTCA
CAACAATTGTTTGCGGCAAGTATGATGCTTTCTGCAATTAAAGAAACACCTTTAGAACCCCCATTAAATCAACAAATTCC
GACGCTTGAAAAAATGGTGCAAGATTCACAATTAGAAATGCGCGCGCTGTTATTACATTTAAGACCGATAGGCTTGAAAG
ATAAATCATTAGGTGAAGGTATTCAATCTTTAGTGACGGAGTTAAAACGTAAAGTTCCATTGAAAGTAGTTCAAGATATC
GGTGAGTTTGATGTGCCTAAGGGAATGGAAGATCATTTATTTAGAATTACACAAGAAGCGATTTCTAATACACTCCGTCA
TTCAAAAGGGACTGAAGTGACGGTGGAATTGTTACAACGAGAAGATTACATATTGCTACGCATTCAAGATGATGGTATCG
GATTTAATGTTGATGATAAGATGGAACAAAGTTATGGATTGAAAAATATGCGTGAACGTGCAATGGAAATTGGCGCGACA
TTTCATATCGTATCATTACCGGATTCAGGTACTCGAATTGAAGTGAAAGCACCATTAGATAAGGAGGGACATAATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

81.268

100

0.813