Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHB56_RS23825 Genome accession   NZ_CP109277
Coordinates   5103239..5104363 (-) Length   374 a.a.
NCBI ID   WP_326754063.1    Uniprot ID   A0ABZ1GPJ4
Organism   Streptomyces sp. NBC_01635     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5098239..5109363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHB56_RS23800 (OHB56_23750) cseB 5098542..5099240 (-) 699 WP_406355541.1 two-component system response regulator CseB -
  OHB56_RS23805 (OHB56_23755) - 5099451..5100113 (-) 663 WP_406355542.1 hypothetical protein -
  OHB56_RS23810 (OHB56_23760) - 5100101..5100640 (-) 540 WP_326754060.1 SigE family RNA polymerase sigma factor -
  OHB56_RS23815 (OHB56_23765) - 5101021..5101956 (-) 936 WP_406355544.1 A/G-specific adenine glycosylase -
  OHB56_RS23820 (OHB56_23770) - 5102296..5103144 (+) 849 WP_326754062.1 hypothetical protein -
  OHB56_RS23825 (OHB56_23775) disA 5103239..5104363 (-) 1125 WP_326754063.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHB56_RS23830 (OHB56_23780) radA 5104606..5106015 (-) 1410 WP_326754064.1 DNA repair protein RadA Machinery gene
  OHB56_RS23835 (OHB56_23785) - 5106212..5108062 (+) 1851 WP_326754065.1 BACON domain-containing protein -
  OHB56_RS23840 (OHB56_23790) - 5108150..5108995 (-) 846 WP_326754066.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40125.86 Da        Isoelectric Point: 5.3568

>NTDB_id=673117 OHB56_RS23825 WP_326754063.1 5103239..5104363(-) (disA) [Streptomyces sp. NBC_01635]
MAANDRAAAPGKSGGSAGSDRLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVETLCSGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEITEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDQALHDLNGLPQAELLDLPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=673117 OHB56_RS23825 WP_326754063.1 5103239..5104363(-) (disA) [Streptomyces sp. NBC_01635]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCGCCGGTTCCGACCGCCTGATGCGCGCCTCGCT
GAGTGCCGTGGCACCCGGCACCGCCCTCCGTGACGGCCTGGAGCGTGTACTGAGGGGCAACACCGGCGGCCTCATCGTCC
TCGGTTCCGACAAGACCGTCGAGACGCTGTGCAGCGGCGGTTTCGTCCTGGACGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATAGTCCTGTCGTCCGACCTGTCGAAGATCCTGCGGGCGGGTGTCCAGCTGGTGCC
GGACCCGACGATCCCGACCGAGGAGACCGGCACCCGGCACCGCACCGCCGACCGGGTCTCCAAGCAGGTCGGCTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTCTACGTGGACGGGCATCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCTCTCGCGACACTGGAGCGCTACAAGCTCCGCCTCGACGAGGTGGCCGGCACGCTGTC
GGCACTGGAGATCGAGGACCTGGTGACCGTGCGGGACGTCTCGGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGCATCG
CCACCGAGATCACCGAGTACGTGGTCGAACTGGGCACCGACGGCCGTCTTCTCGCCCTTCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCCGAGCCCACCGCCAAGCGTTCCCGCACGGTCGACCA
GGCCCTGCACGACCTGAACGGCCTCCCCCAGGCGGAACTGCTGGATCTGCCCACGGTGGCCCGCGCCCTGGGCTACACCG
GCTCCCCCGAGACACTGGACTCGGCCGTGTCCCCGCGCGGCTTCCGGCTGCTCGCCAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGCGTCCGGGAGGGCCTGTCGCGGCTGGCGGAGAGCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.821

92.513

0.433