Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA97_RS04455 Genome accession   NZ_CP094811
Coordinates   935664..936707 (+) Length   347 a.a.
NCBI ID   WP_037566929.1    Uniprot ID   -
Organism   Staphylococcus agnetis strain IVB6187     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 930664..941707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA97_RS04425 (MUA97_04415) - 931192..931923 (+) 732 WP_060551433.1 type 1 glutamine amidotransferase -
  MUA97_RS04430 (MUA97_04420) - 932013..933044 (-) 1032 WP_060551432.1 aromatic acid exporter family protein -
  MUA97_RS04435 (MUA97_04425) - 933164..933481 (-) 318 WP_246864159.1 YkvA family protein -
  MUA97_RS04440 (MUA97_04430) map 933710..934468 (+) 759 WP_060551430.1 type I methionyl aminopeptidase -
  MUA97_RS04445 (MUA97_04435) - 934567..934953 (+) 387 WP_262608802.1 hypothetical protein -
  MUA97_RS04450 (MUA97_04440) liaF 934966..935667 (+) 702 WP_060551429.1 cell wall-active antibiotics response protein LiaF -
  MUA97_RS04455 (MUA97_04445) vraS 935664..936707 (+) 1044 WP_037566929.1 sensor histidine kinase Regulator
  MUA97_RS04460 (MUA97_04450) vraR 936697..937326 (+) 630 WP_262608803.1 response regulator transcription factor Regulator
  MUA97_RS04465 (MUA97_04455) - 937392..937961 (-) 570 WP_037566924.1 carbonic anhydrase -
  MUA97_RS04470 (MUA97_04460) - 937997..939268 (-) 1272 WP_060551427.1 YihY/virulence factor BrkB family protein -
  MUA97_RS04475 (MUA97_04465) - 939384..939659 (-) 276 WP_037566921.1 hypothetical protein -
  MUA97_RS04480 (MUA97_04470) - 939667..940125 (-) 459 WP_060551426.1 low molecular weight protein-tyrosine-phosphatase -
  MUA97_RS04485 (MUA97_04475) - 940258..940467 (+) 210 WP_060551425.1 DUF1128 domain-containing protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39917.91 Da        Isoelectric Point: 4.8594

>NTDB_id=673037 MUA97_RS04455 WP_037566929.1 935664..936707(+) (vraS) [Staphylococcus agnetis strain IVB6187]
MNQYVRSIGSMLILVYSLFTAFFFIDNVFTNIIFFQGMFYTQIFGIPVFLFLNLITIFLCIIVGSVLAYKNNQQNDWLKV
QIERAIEGETVGVNDQQIEIYQETLELYEALVPLNQELHRMRIKTQNLTNESYNINDSKVQKIIEDERHRLARELHDSVS
QQLFAASMMLSAIKETPLEPPLNQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIQSLVTDLQRKVPLKVVQDI
GEFDVPKGMEDHLFRITQEAISNTLRHSKGTEVTVELLQREDYILLRIQDDGIGFNVDDKMEQSYGLKNMRERAMEIGAT
FHIVSLPDSGTRIEVKAPLDKEGHNDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=673037 MUA97_RS04455 WP_037566929.1 935664..936707(+) (vraS) [Staphylococcus agnetis strain IVB6187]
ATGAATCAATACGTACGATCGATAGGTTCAATGCTTATATTAGTGTATAGCTTATTTACAGCTTTCTTCTTTATAGACAA
TGTATTTACGAATATTATTTTCTTTCAAGGTATGTTTTATACACAAATTTTTGGTATACCTGTGTTTCTGTTTTTAAATC
TTATTACCATATTTTTGTGTATTATTGTTGGAAGTGTACTTGCATATAAAAATAATCAACAAAATGATTGGCTTAAAGTT
CAAATTGAACGTGCGATTGAAGGGGAAACCGTTGGTGTAAATGATCAACAAATTGAAATTTACCAAGAAACATTAGAGCT
TTACGAAGCACTCGTGCCACTGAATCAAGAGTTACATCGCATGCGTATTAAAACGCAAAATTTAACGAATGAATCGTATA
ATATCAATGATTCAAAAGTACAAAAAATTATCGAGGATGAACGTCATCGACTTGCTAGAGAACTTCATGACAGTGTGTCA
CAACAATTATTTGCGGCAAGTATGATGCTTTCTGCAATTAAAGAAACGCCTCTAGAACCCCCATTAAATCAACAAATTCC
GACGCTTGAAAAAATGGTGCAAGATTCACAATTAGAAATGCGCGCGCTGTTATTACATTTAAGACCGATAGGCTTGAAAG
ATAAATCATTAGGTGAAGGTATTCAATCTTTAGTGACGGATTTACAACGTAAAGTTCCATTGAAAGTAGTTCAAGATATC
GGTGAGTTTGATGTACCTAAGGGAATGGAAGACCATTTATTTAGAATTACACAAGAAGCGATTTCTAATACACTCCGTCA
TTCAAAAGGGACTGAAGTGACGGTGGAATTGTTACAACGAGAAGATTACATATTGCTACGCATTCAAGATGATGGTATCG
GATTTAATGTTGATGATAAGATGGAACAAAGTTATGGATTGAAAAATATGCGTGAACGTGCAATGGAAATTGGCGCGACA
TTTCATATCGTATCATTACCGGATTCAGGTACTCGAATTGAAGTGAAAGCACCATTAGATAAGGAGGGACATAATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

82.133

100

0.821