Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA95_RS04420 Genome accession   NZ_CP094809
Coordinates   939848..940891 (+) Length   347 a.a.
NCBI ID   WP_262619208.1    Uniprot ID   -
Organism   Staphylococcus agnetis strain IVB6197     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 934848..945891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA95_RS04390 (MUA95_04380) - 935358..936089 (+) 732 WP_262626731.1 type 1 glutamine amidotransferase -
  MUA95_RS04395 (MUA95_04385) - 936202..937227 (-) 1026 WP_105995642.1 FUSC family protein -
  MUA95_RS04400 (MUA95_04390) - 937347..937721 (-) 375 WP_262626732.1 YkvA family protein -
  MUA95_RS04405 (MUA95_04395) map 937894..938652 (+) 759 WP_105995644.1 type I methionyl aminopeptidase -
  MUA95_RS04410 (MUA95_04400) - 938751..939137 (+) 387 WP_262619207.1 hypothetical protein -
  MUA95_RS04415 (MUA95_04405) liaF 939150..939851 (+) 702 WP_103345097.1 cell wall-active antibiotics response protein LiaF -
  MUA95_RS04420 (MUA95_04410) vraS 939848..940891 (+) 1044 WP_262619208.1 sensor histidine kinase Regulator
  MUA95_RS04425 (MUA95_04415) vraR 940881..941510 (+) 630 WP_037566926.1 response regulator transcription factor Regulator
  MUA95_RS04430 (MUA95_04420) - 941577..942146 (-) 570 WP_037566924.1 beta-class carbonic anhydrase -
  MUA95_RS04435 (MUA95_04425) - 942182..943453 (-) 1272 WP_037566922.1 YihY/virulence factor BrkB family protein -
  MUA95_RS04440 (MUA95_04430) - 943569..943844 (-) 276 WP_262626733.1 YtxH domain-containing protein -
  MUA95_RS04445 (MUA95_04435) - 943852..944310 (-) 459 WP_262626734.1 low molecular weight protein-tyrosine-phosphatase -
  MUA95_RS04450 (MUA95_04440) - 944443..944652 (+) 210 WP_262626735.1 DUF1128 domain-containing protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39946.01 Da        Isoelectric Point: 4.9468

>NTDB_id=673005 MUA95_RS04420 WP_262619208.1 939848..940891(+) (vraS) [Staphylococcus agnetis strain IVB6197]
MNQYVRSIGSMLILVYSLFTAFFFIDNVFTNIIFFQGMFYTQIFGIPVFLFLNLITIFLCIIVGSILAYKNNQQNDWLKV
QIERAIEGETVGVNDQQIEIYQETLELYEALVPLNQELHRMRIKTQNLTNESYNINDSKVQKIIEDERHRLARELHDSVS
QQLFAASMMLSAIKETPLEPPLNQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIQSLVTELKRKVPLKVVQDI
GEFDVPKGMEDHLFRITQEAISNTLRHSKGTEVTVELLQREDYILLRIQDDGIGFNVDDKMEQSYGLKNMRERAMEIGAT
FHIVSLPDSGTRIEVKAPLDKEGHNDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=673005 MUA95_RS04420 WP_262619208.1 939848..940891(+) (vraS) [Staphylococcus agnetis strain IVB6197]
ATGAATCAATACGTACGATCGATAGGTTCAATGCTTATTCTAGTGTATAGCTTATTTACAGCTTTCTTTTTTATAGACAA
TGTATTTACGAATATTATTTTCTTTCAAGGCATGTTTTATACACAAATTTTTGGTATACCTGTCTTTCTGTTTTTAAATC
TTATTACCATATTTTTGTGTATTATTGTTGGAAGTATACTTGCATATAAAAATAATCAACAAAATGATTGGCTTAAAGTT
CAAATTGAACGTGCGATTGAAGGGGAAACCGTTGGTGTAAATGATCAACAAATTGAAATTTACCAAGAAACACTAGAGCT
TTACGAAGCACTCGTGCCACTGAATCAAGAGTTACATCGCATGCGTATTAAAACGCAAAATTTAACGAATGAATCGTATA
ATATCAATGATTCAAAAGTACAAAAAATTATTGAGGATGAACGTCATCGACTTGCTAGAGAACTTCATGACAGTGTGTCA
CAACAATTGTTTGCGGCAAGTATGATGCTTTCTGCAATTAAAGAAACACCTTTAGAACCCCCATTAAATCAACAAATTCC
GACGCTTGAAAAAATGGTGCAAGATTCACAATTAGAAATGCGCGCGCTGTTATTACATTTAAGACCGATAGGCTTGAAAG
ATAAATCATTAGGTGAAGGTATTCAATCTTTAGTGACGGAGTTAAAACGTAAAGTTCCATTGAAAGTAGTTCAAGATATC
GGTGAGTTTGATGTGCCTAAGGGAATGGAAGATCATTTATTTAGAATTACACAAGAAGCGATTTCTAATACACTCCGTCA
TTCAAAAGGGACTGAAGTGACGGTGGAATTGTTACAACGAGAAGATTACATATTGCTACGCATTCAAGATGATGGTATCG
GATTTAATGTTGATGATAAGATGGAACAAAGTTATGGATTGAAAAATATGCGTGAACGTGCAATGGAAATTGGCGCGACA
TTTCATATCGTATCATTACCGGATTCAGGTACTCGAATTGAAGTGAAAGCACCATTAGATAAGGAGGGACATAATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

81.268

100

0.813