Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGE   Type   Machinery gene
Locus tag   MUA38_RS07640 Genome accession   NZ_CP094800
Coordinates   1599685..1599984 (-) Length   99 a.a.
NCBI ID   WP_000844413.1    Uniprot ID   X5E258
Organism   Staphylococcus aureus strain IVB6158     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1594685..1604984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA38_RS07615 (MUA38_07615) gcvPA 1595897..1597243 (-) 1347 WP_000019687.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA -
  MUA38_RS07620 (MUA38_07620) gcvT 1597263..1598354 (-) 1092 WP_000093349.1 glycine cleavage system aminomethyltransferase GcvT -
  MUA38_RS07625 (MUA38_07625) - 1598513..1599037 (-) 525 WP_001015120.1 shikimate kinase -
  MUA38_RS07630 (MUA38_07630) - 1599027..1599173 (-) 147 WP_001789879.1 hypothetical protein -
  MUA38_RS07635 (MUA38_07635) comGF 1599270..1599767 (-) 498 WP_029656266.1 competence type IV pilus minor pilin ComGF Machinery gene
  MUA38_RS07640 (MUA38_07640) comGE 1599685..1599984 (-) 300 WP_000844413.1 hypothetical protein Machinery gene
  MUA38_RS07645 (MUA38_07645) comGD 1599971..1600416 (-) 446 Protein_1504 competence type IV pilus minor pilin ComGD -
  MUA38_RS07650 (MUA38_07650) comGC 1600394..1600705 (-) 312 WP_000472256.1 competence type IV pilus major pilin ComGC Machinery gene
  MUA38_RS07655 (MUA38_07655) comGB 1600719..1601789 (-) 1071 WP_000776417.1 competence type IV pilus assembly protein ComGB Machinery gene
  MUA38_RS07660 (MUA38_07660) comGA 1601761..1602735 (-) 975 WP_250426016.1 competence type IV pilus ATPase ComGA Machinery gene
  MUA38_RS07665 (MUA38_07665) - 1602787..1603410 (-) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  MUA38_RS07670 (MUA38_07670) - 1603407..1603736 (-) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  MUA38_RS07675 (MUA38_07675) - 1603736..1604722 (-) 987 WP_000161315.1 ROK family glucokinase -
  MUA38_RS07680 (MUA38_07680) - 1604719..1604922 (-) 204 WP_000087561.1 YqgQ family protein -

Sequence

Protein


Download         Length: 99 a.a.        Molecular weight: 11093.20 Da        Isoelectric Point: 9.9215

>NTDB_id=672837 MUA38_RS07640 WP_000844413.1 1599685..1599984(-) (comGE) [Staphylococcus aureus strain IVB6158]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY

Nucleotide


Download         Length: 300 bp        

>NTDB_id=672837 MUA38_RS07640 WP_000844413.1 1599685..1599984(-) (comGE) [Staphylococcus aureus strain IVB6158]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCTAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACTACTTCTTATCAAAAGACATGTATACAGTATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5E258

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Staphylococcus aureus MW2

86.842

100

1
  comGE Staphylococcus aureus N315

98.99

100

0.99