Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SITYG_RS08940 Genome accession   NZ_AP014880
Coordinates   1763234..1764505 (-) Length   423 a.a.
NCBI ID   WP_096363197.1    Uniprot ID   -
Organism   Streptococcus intermedius strain TYG1620     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1758234..1769505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SITYG_RS08910 (SITYG_17650) - 1759508..1759894 (-) 387 WP_096363191.1 DUF1310 family protein -
  SITYG_RS08915 - 1759914..1760138 (-) 225 WP_096363192.1 hypothetical protein -
  SITYG_RS08920 (SITYG_17660) - 1760135..1760527 (-) 393 WP_096363193.1 DUF1310 family protein -
  SITYG_RS08925 (SITYG_17670) - 1760547..1760771 (-) 225 WP_096363194.1 hypothetical protein -
  SITYG_RS08930 (SITYG_17680) - 1760774..1761160 (-) 387 WP_096363195.1 DUF1310 family protein -
  SITYG_RS08935 (SITYG_17690) - 1761341..1763200 (-) 1860 WP_096363196.1 proline--tRNA ligase -
  SITYG_RS08940 (SITYG_17700) eeP 1763234..1764505 (-) 1272 WP_096363197.1 M50 family metallopeptidase Regulator
  SITYG_RS08945 (SITYG_17710) - 1764657..1765460 (-) 804 WP_003074045.1 phosphatidate cytidylyltransferase -
  SITYG_RS08950 (SITYG_17720) - 1765469..1766218 (-) 750 WP_096363198.1 isoprenyl transferase -
  SITYG_RS08955 (SITYG_17730) yajC 1766686..1767024 (-) 339 WP_003074039.1 preprotein translocase subunit YajC -
  SITYG_RS10695 (SITYG_17740) - 1767427..1767606 (-) 180 WP_231870232.1 hypothetical protein -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 45770.61 Da        Isoelectric Point: 9.6561

>NTDB_id=67279 SITYG_RS08940 WP_096363197.1 1763234..1764505(-) (eeP) [Streptococcus intermedius strain TYG1620]
MQAGIIGIVTFIIIFGIIVVVHEFGHLYFAKKSGILVREFSIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGEDST
EIKTGTPASLSLNEAGKVIRINLSGKKIDQTALPMNVTSFDLENRLEITGLVLDEQKTYAVDHDATIVEEDGTEIRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVADQHTNHVRILQGSVLAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKASKGQAELTITVKSGNKIQKLTVKPKKEQGRYLLGVMPGLKSDLPSMIAGGFSMAWNASFRIFAALKNL
IFHPDINKLGGPVAIYKASSDAAKGGLESVIALLAMISLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAVMVVLLIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=67279 SITYG_RS08940 WP_096363197.1 1763234..1764505(-) (eeP) [Streptococcus intermedius strain TYG1620]
ATGCAAGCAGGTATTATAGGAATCGTTACGTTTATCATTATTTTTGGAATAATCGTTGTTGTTCATGAATTTGGACATCT
CTATTTTGCGAAAAAATCAGGCATTTTGGTGCGCGAGTTTTCCATTGGAATGGGTCCAAAAATTTTTGCTCATATTGGCA
AAGATGGGACAGCATATACTATTCGGATGTTACCGCTTGGTGGATATGTCCGTATGGCTGGCTGGGGTGAAGACTCAACT
GAGATTAAAACAGGCACACCTGCTAGTTTATCTTTGAATGAAGCAGGAAAGGTTATCCGGATTAATCTTTCAGGCAAGAA
AATCGATCAGACGGCCTTACCGATGAATGTGACGAGTTTTGATTTGGAAAATAGACTTGAAATTACGGGTCTGGTTCTAG
ATGAGCAGAAGACTTATGCAGTCGACCATGATGCAACCATCGTAGAAGAAGATGGAACAGAAATACGCATTGCTCCGCTC
GATGTTCAATATCAAAATGCTAGTTTAGGTGGTCGTCTCATTACCAACTTTGCGGGACCAATGAACAATTTCATTTTGGG
GATTGTAGCTTTTTTGCTGTTGATTTTTATGCAGGGTGGTGTTGCAGATCAACATACAAACCATGTTCGGATTTTACAGG
GTAGTGTCCTAGCTCAAGCCGGTGTAAAAAATAATGACCAAATTTTAAAAGTTGGTCAAGCAGAGATCAAGAATTGGTCA
GATTTGACTCAAGCTGTTCAGTCTGAGACGAAAGCTAGCAAAGGACAGGCAGAACTAACCATAACTGTTAAAAGTGGAAA
TAAAATTCAAAAGCTTACAGTTAAGCCCAAAAAAGAGCAAGGCAGATATTTATTAGGAGTAATGCCAGGCTTGAAGTCGG
ATCTTCCATCGATGATCGCAGGTGGGTTTAGCATGGCTTGGAATGCTAGCTTCCGCATCTTTGCAGCTTTGAAAAATTTG
ATTTTCCACCCAGATATCAATAAATTGGGGGGGCCTGTGGCCATTTACAAAGCTAGTAGTGATGCTGCCAAAGGTGGTCT
TGAAAGTGTTATCGCTCTATTGGCTATGATTTCTCTAAACATCGGTATTTTTAATCTCATTCCTATTCCCGCACTTGATG
GTGGAAAGATTGTTCTCAACCTTCTTGAAGCTATTCGTCGCAAACCATTAAAGCAGGAGACAGAAACCTATGTCACTTTA
GCAGGTGTCGCTGTTATGGTAGTGCTGTTAATTGCAGTCACGTGGAATGATATTATGCGAACCTTTTTTTAA

Domains


Predicted by InterproScan.

(10-409)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

64.354

98.818

0.636

  eeP Streptococcus thermophilus LMD-9

64.115

98.818

0.634


Multiple sequence alignment