Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MUA93_RS08160 Genome accession   NZ_CP094793
Coordinates   1682325..1683011 (-) Length   228 a.a.
NCBI ID   WP_072491736.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6165     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1677325..1688011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA93_RS08140 (MUA93_08130) rpsT 1678239..1678490 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  MUA93_RS08145 (MUA93_08135) holA 1678535..1679509 (-) 975 WP_001282572.1 DNA polymerase III subunit delta -
  MUA93_RS08150 (MUA93_08140) comEC 1679566..1681767 (-) 2202 WP_252550437.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MUA93_RS08155 (MUA93_08145) - 1681772..1682233 (-) 462 WP_000439693.1 ComE operon protein 2 -
  MUA93_RS08160 (MUA93_08150) comEA 1682325..1683011 (-) 687 WP_072491736.1 ComEA family DNA-binding protein Machinery gene
  MUA93_RS08165 (MUA93_08155) - 1683051..1683767 (-) 717 WP_000084829.1 class I SAM-dependent DNA methyltransferase -
  MUA93_RS08170 (MUA93_08160) rsfS 1683770..1684123 (-) 354 WP_001088020.1 ribosome silencing factor -
  MUA93_RS08175 (MUA93_08165) yqeK 1684124..1684708 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA93_RS08180 (MUA93_08170) nadD 1684698..1685267 (-) 570 WP_262541853.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA93_RS08185 (MUA93_08175) yhbY 1685270..1685560 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  MUA93_RS08190 (MUA93_08180) aroE 1685564..1686370 (-) 807 WP_000666747.1 shikimate dehydrogenase -
  MUA93_RS08195 (MUA93_08185) yqeH 1686384..1687484 (-) 1101 WP_262528808.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25747.42 Da        Isoelectric Point: 9.6753

>NTDB_id=672683 MUA93_RS08160 WP_072491736.1 1682325..1683011(-) (comEA) [Staphylococcus aureus strain IVB6165]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLSDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=672683 MUA93_RS08160 WP_072491736.1 1682325..1683011(-) (comEA) [Staphylococcus aureus strain IVB6165]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCCGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTATCAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGAAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.238

99.561

0.978
  comEA Staphylococcus aureus N315

98.238

99.561

0.978