Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MUA93_RS04820 Genome accession   NZ_CP094793
Coordinates   993871..994857 (+) Length   328 a.a.
NCBI ID   WP_262543101.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6165     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 988871..999857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA93_RS04795 (MUA93_04785) opp4B 989083..990045 (+) 963 WP_000593417.1 oligopeptide ABC transporter permease -
  MUA93_RS04800 (MUA93_04790) opp4C 990058..990939 (+) 882 WP_001180266.1 oligopeptide ABC transporter permease -
  MUA93_RS04805 (MUA93_04795) trpS 990981..991970 (-) 990 WP_000448935.1 tryptophan--tRNA ligase -
  MUA93_RS04810 (MUA93_04800) spxA 992265..992660 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  MUA93_RS04815 (MUA93_04805) mecA 993031..993750 (+) 720 WP_001217727.1 adaptor protein MecA -
  MUA93_RS04820 (MUA93_04810) coiA 993871..994857 (+) 987 WP_262543101.1 competence protein CoiA Machinery gene
  MUA93_RS04825 (MUA93_04815) pepF 994905..996713 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  MUA93_RS04830 (MUA93_04820) yjbH 997173..997979 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  MUA93_RS04835 (MUA93_04825) - 998002..998367 (-) 366 WP_000214066.1 truncated hemoglobin YjbI -
  MUA93_RS04840 (MUA93_04830) - 998471..999064 (-) 594 WP_252549968.1 CYTH domain-containing protein -
  MUA93_RS04845 (MUA93_04835) - 999250..999597 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38760.37 Da        Isoelectric Point: 9.7732

>NTDB_id=672669 MUA93_RS04820 WP_262543101.1 993871..994857(+) (coiA) [Staphylococcus aureus strain IVB6165]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEAFLKKIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=672669 MUA93_RS04820 WP_262543101.1 993871..994857(+) (coiA) [Staphylococcus aureus strain IVB6165]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGGCATTTTTAAAAAAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966