Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | SITYG_RS04460 | Genome accession | NZ_AP014880 |
| Coordinates | 886809..888041 (+) | Length | 410 a.a. |
| NCBI ID | WP_003072918.1 | Uniprot ID | A0A1L7MUF6 |
| Organism | Streptococcus intermedius strain TYG1620 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 881809..893041
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SITYG_RS04425 | - | 882483..883325 (+) | 843 | Protein_846 | phosphate ABC transporter ATPase | - |
| SITYG_RS04430 (SITYG_08640) | - | 883364..883627 (+) | 264 | WP_096362783.1 | chorismate mutase | - |
| SITYG_RS04435 (SITYG_08650) | - | 883643..884860 (+) | 1218 | WP_096362784.1 | chloride channel protein | - |
| SITYG_RS04440 (SITYG_08660) | - | 884946..885785 (+) | 840 | WP_003072923.1 | thymidylate synthase | - |
| SITYG_RS04450 (SITYG_08680) | - | 886070..886582 (+) | 513 | WP_096362785.1 | dihydrofolate reductase | - |
| SITYG_RS10420 (SITYG_08690) | - | 886582..886755 (+) | 174 | WP_003024903.1 | hypothetical protein | - |
| SITYG_RS04460 (SITYG_08700) | clpX | 886809..888041 (+) | 1233 | WP_003072918.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| SITYG_RS04465 (SITYG_08710) | yihA | 888054..888641 (+) | 588 | WP_003068868.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| SITYG_RS04470 (SITYG_08720) | - | 888764..889471 (+) | 708 | WP_003077899.1 | glucosaminidase domain-containing protein | - |
| SITYG_RS04475 (SITYG_08730) | - | 889647..890444 (+) | 798 | WP_096362786.1 | formate/nitrite transporter family protein | - |
| SITYG_RS04480 (SITYG_08740) | - | 890662..892398 (+) | 1737 | WP_096362787.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45705.19 Da Isoelectric Point: 4.3968
>NTDB_id=67257 SITYG_RS04460 WP_003072918.1 886809..888041(+) (clpX) [Streptococcus intermedius strain TYG1620]
MPTNRTSEMMVYCSFCGKSQEEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPQELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDNREEEDDVELQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKAIDENSSYMQEIISEDIQKFGLIPELIGRLPVFAALEPLTVEDLVR
ILREPKNALVKQYQTLLSYDDVTLEFDDDALQEIANKAIERKTGARGLRSIIEETMMDIMFEVPSQENVKLVRITKEAVD
GTDKPILETA
MPTNRTSEMMVYCSFCGKSQEEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPQELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDNREEEDDVELQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKAIDENSSYMQEIISEDIQKFGLIPELIGRLPVFAALEPLTVEDLVR
ILREPKNALVKQYQTLLSYDDVTLEFDDDALQEIANKAIERKTGARGLRSIIEETMMDIMFEVPSQENVKLVRITKEAVD
GTDKPILETA
Nucleotide
Download Length: 1233 bp
>NTDB_id=67257 SITYG_RS04460 WP_003072918.1 886809..888041(+) (clpX) [Streptococcus intermedius strain TYG1620]
ATGCCTACAAATCGTACGAGCGAAATGATGGTTTATTGTTCTTTTTGTGGTAAAAGTCAAGAAGAAGTTCAAAAAATTAT
TGCAGGGAATAATGCATTTATTTGTAACGAATGTGTGGAATTAGCACAAGAAATTATTAGAGAAGAATTAGCAGAAGAAG
TCTTGGCAGACTTGTCGGAAGTACCAAAACCACAAGAATTGCTTAACATTTTAAATCACTATGTAATAGGGCAAGATCGT
GCAAAGCGAGCGCTGGCTGTTGCTGTATACAATCACTATAAACGTATCAATTTTCACGATAATCGTGAAGAAGAGGATGA
TGTCGAATTACAAAAATCCAATATTCTTATGATTGGTCCAACCGGTTCTGGTAAGACTTTTCTTGCTCAAACTTTAGCGA
AAAGTCTAAATGTTCCCTTTGCGATTGCAGATGCAACGGCTTTGACAGAAGCTGGATATGTCGGAGAAGATGTTGAAAAC
ATTCTCTTAAAACTCTTGCAAGCTGCAGATTTTAATATTGAGCGTGCAGAACGTGGCATTATCTATGTAGATGAGATTGA
CAAAATTGCAAAGAAAAGCGAAAATGTCTCTATTACTCGTGATGTGTCTGGTGAAGGCGTTCAGCAAGCTTTGCTTAAAA
TCATTGAAGGGACTGTAGCTAGTGTACCTCCTCAAGGCGGTCGCAAACATCCACAGCAAGAAATGATTCAAGTGGATACC
AAGAATATTCTTTTTATCGTTGGCGGTGCTTTTGACGGAATTGAAGAAATCGTCAAACAACGTCTAGGTGAAAAGATTAT
TGGTTTTGGTCAAAATAACAAAGCTATTGATGAAAATAGTTCTTATATGCAAGAAATTATTTCCGAAGATATTCAAAAAT
TTGGACTTATCCCCGAATTGATTGGTCGTTTACCAGTGTTTGCTGCGCTTGAGCCTTTGACAGTTGAGGATTTAGTACGA
ATTCTTCGTGAGCCAAAGAACGCCCTAGTAAAACAATATCAAACTCTCCTTTCTTATGATGATGTTACATTAGAGTTTGA
TGATGATGCCCTCCAAGAAATTGCCAATAAGGCTATTGAACGTAAGACAGGTGCTCGTGGATTGCGTTCAATTATTGAAG
AAACTATGATGGATATCATGTTTGAAGTCCCAAGTCAAGAAAATGTGAAATTAGTGCGGATTACCAAGGAAGCAGTTGAT
GGAACAGATAAACCGATTTTAGAAACAGCTTAA
ATGCCTACAAATCGTACGAGCGAAATGATGGTTTATTGTTCTTTTTGTGGTAAAAGTCAAGAAGAAGTTCAAAAAATTAT
TGCAGGGAATAATGCATTTATTTGTAACGAATGTGTGGAATTAGCACAAGAAATTATTAGAGAAGAATTAGCAGAAGAAG
TCTTGGCAGACTTGTCGGAAGTACCAAAACCACAAGAATTGCTTAACATTTTAAATCACTATGTAATAGGGCAAGATCGT
GCAAAGCGAGCGCTGGCTGTTGCTGTATACAATCACTATAAACGTATCAATTTTCACGATAATCGTGAAGAAGAGGATGA
TGTCGAATTACAAAAATCCAATATTCTTATGATTGGTCCAACCGGTTCTGGTAAGACTTTTCTTGCTCAAACTTTAGCGA
AAAGTCTAAATGTTCCCTTTGCGATTGCAGATGCAACGGCTTTGACAGAAGCTGGATATGTCGGAGAAGATGTTGAAAAC
ATTCTCTTAAAACTCTTGCAAGCTGCAGATTTTAATATTGAGCGTGCAGAACGTGGCATTATCTATGTAGATGAGATTGA
CAAAATTGCAAAGAAAAGCGAAAATGTCTCTATTACTCGTGATGTGTCTGGTGAAGGCGTTCAGCAAGCTTTGCTTAAAA
TCATTGAAGGGACTGTAGCTAGTGTACCTCCTCAAGGCGGTCGCAAACATCCACAGCAAGAAATGATTCAAGTGGATACC
AAGAATATTCTTTTTATCGTTGGCGGTGCTTTTGACGGAATTGAAGAAATCGTCAAACAACGTCTAGGTGAAAAGATTAT
TGGTTTTGGTCAAAATAACAAAGCTATTGATGAAAATAGTTCTTATATGCAAGAAATTATTTCCGAAGATATTCAAAAAT
TTGGACTTATCCCCGAATTGATTGGTCGTTTACCAGTGTTTGCTGCGCTTGAGCCTTTGACAGTTGAGGATTTAGTACGA
ATTCTTCGTGAGCCAAAGAACGCCCTAGTAAAACAATATCAAACTCTCCTTTCTTATGATGATGTTACATTAGAGTTTGA
TGATGATGCCCTCCAAGAAATTGCCAATAAGGCTATTGAACGTAAGACAGGTGCTCGTGGATTGCGTTCAATTATTGAAG
AAACTATGATGGATATCATGTTTGAAGTCCCAAGTCAAGAAAATGTGAAATTAGTGCGGATTACCAAGGAAGCAGTTGAT
GGAACAGATAAACCGATTTTAGAAACAGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
86.341 |
100 |
0.863 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.706 |
98.049 |
0.576 |