Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MUA13_RS07945 Genome accession   NZ_CP094787
Coordinates   1649749..1650435 (-) Length   228 a.a.
NCBI ID   WP_072353822.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6168     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1644749..1655435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA13_RS07925 (MUA13_07915) rpsT 1645663..1645914 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  MUA13_RS07930 (MUA13_07920) holA 1645959..1646933 (-) 975 WP_252570658.1 DNA polymerase III subunit delta -
  MUA13_RS07935 (MUA13_07925) comEC 1646990..1649191 (-) 2202 WP_001670363.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MUA13_RS07940 (MUA13_07930) - 1649196..1649657 (-) 462 WP_000439693.1 ComE operon protein 2 -
  MUA13_RS07945 (MUA13_07935) comEA 1649749..1650435 (-) 687 WP_072353822.1 ComEA family DNA-binding protein Machinery gene
  MUA13_RS07950 (MUA13_07940) - 1650475..1651191 (-) 717 WP_252570659.1 class I SAM-dependent methyltransferase -
  MUA13_RS07955 (MUA13_07945) rsfS 1651194..1651547 (-) 354 WP_001088022.1 ribosome silencing factor -
  MUA13_RS07960 (MUA13_07950) yqeK 1651548..1652132 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA13_RS07965 (MUA13_07955) nadD 1652122..1652691 (-) 570 WP_252570660.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA13_RS07970 (MUA13_07960) yhbY 1652694..1652984 (-) 291 WP_000955231.1 ribosome assembly RNA-binding protein YhbY -
  MUA13_RS07975 (MUA13_07965) aroE 1652988..1653794 (-) 807 WP_252570661.1 shikimate dehydrogenase -
  MUA13_RS07980 (MUA13_07970) yqeH 1653808..1654908 (-) 1101 WP_252570662.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.50 Da        Isoelectric Point: 9.6753

>NTDB_id=672552 MUA13_RS07945 WP_072353822.1 1649749..1650435(-) (comEA) [Staphylococcus aureus strain IVB6168]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=672552 MUA13_RS07945 WP_072353822.1 1649749..1650435(-) (comEA) [Staphylococcus aureus strain IVB6168]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.561

100

0.996
  comEA Staphylococcus aureus N315

97.807

100

0.978