Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   MUA13_RS06125 Genome accession   NZ_CP094787
Coordinates   1256305..1257177 (+) Length   290 a.a.
NCBI ID   WP_262522559.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6168     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1251305..1262177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA13_RS06105 (MUA13_06100) sucC 1251419..1252585 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  MUA13_RS06110 (MUA13_06105) sucD 1252607..1253515 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  MUA13_RS06115 (MUA13_06110) - 1253742..1254860 (+) 1119 WP_043044513.1 LysM peptidoglycan-binding domain-containing protein -
  MUA13_RS06120 (MUA13_06115) fmhC 1254888..1256132 (+) 1245 WP_000672869.1 FemA/FemB family glycyltransferase FmhC -
  MUA13_RS06125 (MUA13_06120) dprA 1256305..1257177 (+) 873 WP_262522559.1 DNA-processing protein DprA Machinery gene
  MUA13_RS06130 (MUA13_06125) topA 1257351..1259426 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  MUA13_RS06135 (MUA13_06130) trmFO 1259582..1260889 (+) 1308 WP_000195259.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33609.03 Da        Isoelectric Point: 9.5960

>NTDB_id=672540 MUA13_RS06125 WP_262522559.1 1256305..1257177(+) (dprA) [Staphylococcus aureus strain IVB6168]
MIKLFLLKLYWAHFSTKQIHQFLMAYPNVIKEEGRKKDSYLFEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDSEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=672540 MUA13_RS06125 WP_262522559.1 1256305..1257177(+) (dprA) [Staphylococcus aureus strain IVB6168]
TTGATTAAACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGAAGGAAGAAAAAAAGATAGTTATTTATTTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATTCTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATTGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATCGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

99.655

100

0.997
  dprA Staphylococcus aureus N315

99.31

100

0.993