Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MUA13_RS04835 Genome accession   NZ_CP094787
Coordinates   993358..994344 (+) Length   328 a.a.
NCBI ID   WP_252569991.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6168     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 988358..999344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA13_RS04810 (MUA13_04805) opp4B 988571..989533 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  MUA13_RS04815 (MUA13_04810) opp4C 989545..990426 (+) 882 WP_252569997.1 oligopeptide ABC transporter permease -
  MUA13_RS04820 (MUA13_04815) trpS 990468..991457 (-) 990 WP_252569994.1 tryptophan--tRNA ligase -
  MUA13_RS04825 (MUA13_04820) spxA 991752..992147 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  MUA13_RS04830 (MUA13_04825) mecA 992518..993237 (+) 720 WP_001217730.1 adaptor protein MecA -
  MUA13_RS04835 (MUA13_04830) coiA 993358..994344 (+) 987 WP_252569991.1 competence protein CoiA Machinery gene
  MUA13_RS04840 (MUA13_04835) pepF 994392..996200 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  MUA13_RS04845 (MUA13_04840) yjbH 996660..997466 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  MUA13_RS04850 (MUA13_04845) - 997489..997854 (-) 366 WP_000214065.1 truncated hemoglobin YjbI -
  MUA13_RS04855 (MUA13_04850) - 997958..998551 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  MUA13_RS04860 (MUA13_04855) - 998737..999084 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38895.51 Da        Isoelectric Point: 9.5714

>NTDB_id=672538 MUA13_RS04835 WP_252569991.1 993358..994344(+) (coiA) [Staphylococcus aureus strain IVB6168]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=672538 MUA13_RS04835 WP_252569991.1 993358..994344(+) (coiA) [Staphylococcus aureus strain IVB6168]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTATTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

98.78

100

0.988
  coiA Staphylococcus aureus MW2

98.78

100

0.988