Detailed information NTG0672494

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG963_RS29620
• Genome accession: NZ_CP109190
• Coordinates: 6604897..6606195 (+)
• Length: 432 a.a.
• NCBI ID: WP_030921263.1
• Uniprot ID: A0ABV2UFH0
• Organism: Streptomyces sp. NBC_01707
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6599897..6611195

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG963_RS29590 (OG963_29605)	-	6601021..6601215 (+)	195	WP_030921275.1	hypothetical protein	-
OG963_RS29605 (OG963_29620)	tig	6601750..6603138 (+)	1389	WP_093774332.1	trigger factor	-
OG963_RS29610 (OG963_29625)	-	6603403..6604008 (+)	606	WP_018551584.1	ATP-dependent Clp protease proteolytic subunit	-
OG963_RS29615 (OG963_29630)	clpP	6604056..6604739 (+)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG963_RS29620 (OG963_29635)	clpX	6604897..6606195 (+)	1299	WP_030921263.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG963_RS29625 (OG963_29640)	-	6606271..6607254 (-)	984	WP_093774336.1	hypothetical protein	-
OG963_RS29630 (OG963_29645)	-	6607393..6610014 (+)	2622	WP_093774338.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47270.09 Da
• Isoelectric Point: 4.8824

>NTDB_id=672494 OG963_RS29620 WP_030921263.1 6604897..6606195(+) (clpX) [Streptomyces sp. NBC_01707]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=672494 OG963_RS29620 WP_030921263.1 6604897..6606195(+) (clpX) [Streptomyces sp. NBC_01707]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTCAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAGGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGATCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTTC
GGGCCATCATGGAGGAGGTCCTGCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGTGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509