Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG963_RS25585 Genome accession   NZ_CP109190
Coordinates   5673988..5675112 (-) Length   374 a.a.
NCBI ID   WP_030972387.1    Uniprot ID   A0ABV2U8C8
Organism   Streptomyces sp. NBC_01707     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5668988..5680112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG963_RS25565 (OG963_25580) - 5669729..5670418 (-) 690 WP_093777832.1 hypothetical protein -
  OG963_RS25570 (OG963_25585) - 5670406..5671056 (-) 651 WP_030925343.1 SigE family RNA polymerase sigma factor -
  OG963_RS25575 (OG963_25590) - 5671233..5672132 (-) 900 WP_030925345.1 A/G-specific adenine glycosylase -
  OG963_RS25580 (OG963_25595) - 5672971..5673780 (+) 810 WP_371799484.1 hypothetical protein -
  OG963_RS25585 (OG963_25600) disA 5673988..5675112 (-) 1125 WP_030972387.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG963_RS25590 (OG963_25605) radA/sms 5675193..5676605 (-) 1413 WP_030925349.1 DNA repair protein RadA Machinery gene
  OG963_RS25595 (OG963_25610) - 5676796..5678622 (+) 1827 WP_093777830.1 hypothetical protein -
  OG963_RS25600 (OG963_25615) - 5678654..5679523 (-) 870 WP_093777828.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40389.30 Da        Isoelectric Point: 4.8644

>NTDB_id=672483 OG963_RS25585 WP_030972387.1 5673988..5675112(-) (disA) [Streptomyces sp. NBC_01707]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=672483 OG963_RS25585 WP_030972387.1 5673988..5675112(-) (disA) [Streptomyces sp. NBC_01707]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCGAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGGGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCGCAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATACGTGGTGGAACTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCTGAGCGGGAACTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGGGCTCTCGCACACCGAACTGCTCGAACTGCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCC
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCACGGGCGCGCAGCGTGCGCGAAGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTCGAGCGGTACG
TCTAA

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433