Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   MUA59_RS07835 Genome accession   NZ_CP094782
Coordinates   1604347..1606035 (-) Length   562 a.a.
NCBI ID   WP_262613743.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6172     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1599347..1611035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA59_RS07820 (MUA59_07800) lepA 1600851..1602674 (-) 1824 WP_262607524.1 translation elongation factor 4 -
  MUA59_RS07825 (MUA59_07805) rpsT 1603020..1603271 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  MUA59_RS07830 (MUA59_07810) holA 1603316..1604290 (-) 975 WP_001282559.1 DNA polymerase III subunit delta -
  MUA59_RS07835 (MUA59_07815) comEC 1604347..1606035 (-) 1689 WP_262613743.1 ComEC/Rec2 family competence protein Machinery gene
  MUA59_RS07840 (MUA59_07820) - 1606040..1606501 (-) 462 WP_000439693.1 ComE operon protein 2 -
  MUA59_RS07845 (MUA59_07825) comEA 1606593..1607279 (-) 687 WP_262538652.1 ComEA family DNA-binding protein Machinery gene
  MUA59_RS07850 (MUA59_07830) - 1607319..1608035 (-) 717 WP_115305447.1 class I SAM-dependent methyltransferase -
  MUA59_RS07855 (MUA59_07835) rsfS 1608038..1608391 (-) 354 WP_001088020.1 ribosome silencing factor -
  MUA59_RS07860 (MUA59_07840) yqeK 1608392..1608976 (-) 585 WP_262607526.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA59_RS07865 (MUA59_07845) nadD 1608966..1609535 (-) 570 WP_000725161.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA59_RS07870 (MUA59_07850) yhbY 1609538..1609828 (-) 291 WP_262613745.1 ribosome assembly RNA-binding protein YhbY -
  MUA59_RS07875 (MUA59_07855) aroE 1609832..1610638 (-) 807 WP_262607527.1 shikimate dehydrogenase -

Sequence

Protein


Download         Length: 562 a.a.        Molecular weight: 64405.14 Da        Isoelectric Point: 10.0745

>NTDB_id=672463 MUA59_RS07835 WP_262613743.1 1604347..1606035(-) (comEC) [Staphylococcus aureus strain IVB6172]
MLYVALSMIVGVLWNSSKVLSTFLFILLLYIAYRKNKIVYAPISLFLIIFSSWYLHYSQQATFNYINYIERNSQFNERAQ
VIQIQRQGSDTYKGRLSLKNEIYPFFLTNKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLESNRSNLIEK
HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNLPLFVIKGIT
IIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIHLLAFAFIITFPTNSHHKITMLNVGQGDSILYEGGKNQNVL
IDTGGKVIDDTKQPSYSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKGYSSNTLMLLSK
LSHKYNIKLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKKVLLMGDASKNNESLLLKKYNLPEIDIL
KVGHHGSKTSSSKEFIEMIKPKISLISSGKNNMYHLPNIEVVKRLQGIRSRIYNSQQNGQVTIDLDDNLKVDSNSYGNAS
GL

Nucleotide


Download         Length: 1689 bp        

>NTDB_id=672463 MUA59_RS07835 WP_262613743.1 1604347..1606035(-) (comEC) [Staphylococcus aureus strain IVB6172]
TTGCTGTATGTCGCATTATCAATGATTGTAGGAGTGCTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTATATTGCTTATCGTAAAAATAAAATCGTTTATGCCCCTATTTCTCTCTTTTTAATCATTTTCTCCTCATGGT
ATTTACATTATTCACAACAAGCAACATTTAATTATATCAATTATATTGAACGTAATTCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGGTAGTGACACATATAAAGGTAGGTTGAGTTTAAAAAATGAAATATATCCTTTCTTTTT
AACAAATAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGACA
ATAAGTTTGTAACTCTTAAATTACAAAGTATAGTTGTACAAAGCTGCCTAGAATCGAACCGGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCGGATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTTAGTGGCTCGC
ATATAGCTGCAATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTACCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAGCTTTATTTGCTCAATATACAAATTATGCACCTAGTGCTGTAAGAGCTATAATAATGACAACTCTTGT
ACTGCTTATTACTAAGCAAATTAAAATAAAGGGTATTCATCTATTAGCATTTGCATTTATAATAACGTTTCCAACAAATT
CACATCACAAAATTACAATGTTAAATGTGGGGCAGGGAGACAGTATTTTATATGAAGGTGGTAAGAACCAAAATGTCTTG
ATTGATACAGGTGGGAAAGTGATTGATGATACTAAACAACCTAGTTATTCAATTTCTAAATATCATATTTTACCAACGCT
AAATGAAAGAGGGATAAATGAATTAGAGTATCTAATTTTAACACATCCACACAATGACCATATTGGTGAAGTGGAATATA
TTATTAGTCATATTAAAATTAAACATATAGTGATATACAATAAGGGATATAGTAGTAATACATTGATGTTATTATCGAAA
TTAAGCCATAAGTATAACATTAAACTTATGGATGTAAGACAAGTTAGTAGTTTTAAACTTGGAGATAGTAGTTTTCTATT
TTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATGAATATTCGATTATTACTATGATTACATATCAAAATAAAAAAG
TTTTATTAATGGGCGATGCTAGTAAAAATAATGAATCTTTACTACTAAAAAAATATAACTTGCCGGAGATTGATATTTTA
AAAGTAGGACATCATGGGAGCAAGACAAGTAGTTCTAAAGAATTTATAGAGATGATTAAGCCTAAAATAAGTTTGATTTC
TTCTGGGAAGAACAATATGTATCATCTTCCTAACATAGAAGTTGTTAAACGATTGCAAGGGATTCGCAGTCGCATTTACA
ATAGTCAACAAAACGGTCAAGTTACAATTGACTTAGATGATAATTTAAAAGTTGATTCAAACTCTTATGGAAATGCAAGT
GGTTTATAG

Domains

Predicted by InterproScan.

Competence protein (Competence)

(183-289)

Metallo-beta-lactamase superfamily (Lactamase_B)

(303-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Staphylococcus aureus MW2

97.611

52.135

0.509
  comEC Staphylococcus aureus N315

96.587

52.135

0.504