Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   MUA18_RS06095 Genome accession   NZ_CP094780
Coordinates   1254998..1255870 (+) Length   290 a.a.
NCBI ID   WP_262542339.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6173     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1249998..1260870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA18_RS06065 (MUA18_06060) - 1250144..1250911 (+) 768 WP_000176398.1 ribonuclease HII -
  MUA18_RS06070 (MUA18_06065) sucC 1251020..1252186 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  MUA18_RS06075 (MUA18_06070) sucD 1252208..1253116 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  MUA18_RS06080 - 1253342..1253398 (+) 57 Protein_1191 YSIRK-type signal peptide-containing protein -
  MUA18_RS06085 (MUA18_06080) - 1253402..1253554 (+) 153 Protein_1192 cell wall hydrolase -
  MUA18_RS06090 (MUA18_06085) fmhC 1253582..1254826 (+) 1245 WP_262543105.1 FemA/FemB family glycyltransferase FmhC -
  MUA18_RS06095 (MUA18_06090) dprA 1254998..1255870 (+) 873 WP_262542339.1 DNA-processing protein DprA Machinery gene
  MUA18_RS06100 (MUA18_06095) topA 1256044..1258119 (+) 2076 WP_078064619.1 type I DNA topoisomerase -
  MUA18_RS06105 (MUA18_06100) trmFO 1258275..1259582 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33474.93 Da        Isoelectric Point: 9.5435

>NTDB_id=672412 MUA18_RS06095 WP_262542339.1 1254998..1255870(+) (dprA) [Staphylococcus aureus strain IVB6173]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TCMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=672412 MUA18_RS06095 WP_262542339.1 1254998..1255870(+) (dprA) [Staphylococcus aureus strain IVB6173]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGACATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATGTATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACGAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCGCCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGTAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGAGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.621

100

0.986
  dprA Staphylococcus aureus N315

98.276

100

0.983