Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   MUA10_RS05195 Genome accession   NZ_CP094778
Coordinates   1068034..1068603 (-) Length   189 a.a.
NCBI ID   WP_250396321.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6185     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1063034..1073603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA10_RS05175 (MUA10_05170) - 1064537..1065895 (+) 1359 WP_045179025.1 TrkH family potassium uptake protein -
  MUA10_RS05180 (MUA10_05175) - 1066034..1067545 (+) 1512 WP_045179022.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  MUA10_RS05195 (MUA10_05190) comK/comK1 1068034..1068603 (-) 570 WP_250396321.1 competence protein ComK Regulator
  MUA10_RS05200 (MUA10_05195) - 1068813..1069031 (+) 219 WP_000876825.1 IDEAL domain-containing protein -
  MUA10_RS05205 (MUA10_05200) - 1069112..1070098 (-) 987 WP_250396320.1 lipoate--protein ligase -
  MUA10_RS05210 (MUA10_05205) - 1070297..1070473 (+) 177 WP_000214898.1 YkvS family protein -
  MUA10_RS05215 (MUA10_05210) - 1070488..1071090 (+) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  MUA10_RS14390 - 1071406..1071468 (+) 63 WP_240785570.1 putative holin-like toxin -
  MUA10_RS05220 (MUA10_05215) - 1072007..1072108 (+) 102 WP_001790623.1 hypothetical protein -
  MUA10_RS05225 (MUA10_05220) - 1072118..1072390 (+) 273 WP_001794574.1 lactococcin 972 family bacteriocin -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22663.90 Da        Isoelectric Point: 9.5795

>NTDB_id=672370 MUA10_RS05195 WP_250396321.1 1068034..1068603(-) (comK/comK1) [Staphylococcus aureus strain IVB6185]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRISGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYYLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=672370 MUA10_RS05195 WP_250396321.1 1068034..1068603(-) (comK/comK1) [Staphylococcus aureus strain IVB6185]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTAGTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCACCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTATTTATTTGA
AGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(5-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

98.942

100

0.989
  comK/comK1 Staphylococcus aureus N315

98.942

100

0.989