Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MUA69_RS07840 Genome accession   NZ_CP094775
Coordinates   1613234..1613920 (-) Length   228 a.a.
NCBI ID   WP_262538652.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6191     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1608234..1618920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA69_RS07820 (MUA69_07800) rpsT 1609148..1609399 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  MUA69_RS07825 (MUA69_07805) holA 1609444..1610418 (-) 975 WP_001282559.1 DNA polymerase III subunit delta -
  MUA69_RS07830 (MUA69_07810) comEC 1610475..1612676 (-) 2202 WP_262607525.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MUA69_RS07835 (MUA69_07815) - 1612681..1613142 (-) 462 WP_000439693.1 ComE operon protein 2 -
  MUA69_RS07840 (MUA69_07820) comEA 1613234..1613920 (-) 687 WP_262538652.1 ComEA family DNA-binding protein Machinery gene
  MUA69_RS07845 (MUA69_07825) - 1613960..1614676 (-) 717 WP_115305447.1 class I SAM-dependent DNA methyltransferase -
  MUA69_RS07850 (MUA69_07830) rsfS 1614679..1615032 (-) 354 WP_001088020.1 ribosome silencing factor -
  MUA69_RS07855 (MUA69_07835) yqeK 1615033..1615617 (-) 585 WP_262607526.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA69_RS07860 (MUA69_07840) nadD 1615607..1616176 (-) 570 WP_000725161.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA69_RS07865 (MUA69_07845) yhbY 1616179..1616469 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  MUA69_RS07870 (MUA69_07850) aroE 1616473..1617279 (-) 807 WP_262607527.1 shikimate dehydrogenase -
  MUA69_RS07875 (MUA69_07855) yqeH 1617293..1618393 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.55 Da        Isoelectric Point: 9.7859

>NTDB_id=672341 MUA69_RS07840 WP_262538652.1 1613234..1613920(-) (comEA) [Staphylococcus aureus strain IVB6191]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLSDQKMIFIPHKGQKNVEPQIGVKSVHVKN
GNINNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=672341 MUA69_RS07840 WP_262538652.1 1613234..1613920(-) (comEA) [Staphylococcus aureus strain IVB6191]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTATCAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAAAAGTGTGCACGTAAAAAAT
GGAAACATAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

97.357

99.561

0.969
  comEA Staphylococcus aureus N315

97.357

99.561

0.969