Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OIE77_RS19980 Genome accession   NZ_CP109182
Coordinates   4722777..4723901 (+) Length   374 a.a.
NCBI ID   WP_148012277.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01715     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4717777..4728901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE77_RS19965 (OIE77_19960) - 4718255..4719115 (+) 861 WP_148012274.1 hypothetical protein -
  OIE77_RS19970 (OIE77_19965) - 4719119..4720870 (-) 1752 WP_329321912.1 hypothetical protein -
  OIE77_RS19975 (OIE77_19970) radA/sms 4721299..4722708 (+) 1410 WP_148012276.1 DNA repair protein RadA Machinery gene
  OIE77_RS19980 (OIE77_19975) disA 4722777..4723901 (+) 1125 WP_148012277.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIE77_RS19985 (OIE77_19980) - 4724050..4724886 (-) 837 WP_329321915.1 hypothetical protein -
  OIE77_RS19990 (OIE77_19985) - 4725444..4726364 (+) 921 WP_148012280.1 A/G-specific adenine glycosylase -
  OIE77_RS19995 (OIE77_19990) - 4726625..4727176 (+) 552 WP_148012281.1 SigE family RNA polymerase sigma factor -
  OIE77_RS20000 (OIE77_19995) - 4727206..4727823 (+) 618 WP_329323734.1 hypothetical protein -
  OIE77_RS20005 (OIE77_20000) cseB 4727853..4728563 (+) 711 WP_148012282.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40117.94 Da        Isoelectric Point: 5.0058

>NTDB_id=672305 OIE77_RS19980 WP_148012277.1 4722777..4723901(+) (disA) [Streptomyces sp. NBC_01715]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELNALAHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=672305 OIE77_RS19980 WP_148012277.1 4722777..4723901(+) (disA) [Streptomyces sp. NBC_01715]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCGTT
GAGCGCTGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAACGGATCCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCGACAAGGACATCACCAAGATCCTCCGGGCCGGCGTCCAGCTGGTGCC
GGACCCGACGATCCCGACCGAGGAGACCGGTACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGTTGATCGCCCTCTACGTCGACGGTCAGCGACGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCGCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGTCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTCGTCACCGTCCGGGACGTGTCGGCGGTGGCCCAGCGTCTGGAGATGGTGCGCCGCATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGTTGGGCACCGACGGACGTCTGCTCGCCCTCCAGCTCGACGAACTGATCGCG
GGCGTCGAACCCGAGCGTGAGCTGGTGGTCCGCGACTACGTGCCCGAGCCGACCGCGAAGCGCTCCCGCACGGTGGACGA
GGCGCTCTCCGAGCTGAACGCCCTCGCCCACGCCGAGCTGCTCGAACTGCCCACCGTGGCAAGGGCGCTGGGCTACACCG
GCTCCCCCGAGGCGCTCGACTCCGCGGTCTCGCCGCGTGGGTTCCGGCTCCTCGCGAAGGTCCCGCGCCTGCCCGGCGCG
ATCATCGACCGTCTCGTCGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGGCGGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTACGCGAGGGGCTCTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433