Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MUA47_RS04930 Genome accession   NZ_CP094773
Coordinates   1013301..1014287 (+) Length   328 a.a.
NCBI ID   WP_000959277.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6195     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1008301..1019287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA47_RS04905 (MUA47_04905) opp4B 1008504..1009466 (+) 963 WP_000593417.1 oligopeptide ABC transporter permease -
  MUA47_RS04910 (MUA47_04910) opp4C 1009478..1010359 (+) 882 WP_001180271.1 oligopeptide ABC transporter permease -
  MUA47_RS04915 (MUA47_04915) trpS 1010401..1011390 (-) 990 WP_000448929.1 tryptophan--tRNA ligase -
  MUA47_RS04920 (MUA47_04920) spxA 1011685..1012080 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  MUA47_RS04925 (MUA47_04925) mecA 1012461..1013180 (+) 720 WP_001217727.1 adaptor protein MecA -
  MUA47_RS04930 (MUA47_04930) coiA 1013301..1014287 (+) 987 WP_000959277.1 competence protein CoiA Machinery gene
  MUA47_RS04935 (MUA47_04935) pepF 1014335..1016143 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  MUA47_RS04940 (MUA47_04940) yjbH 1016604..1017410 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  MUA47_RS04945 (MUA47_04945) - 1017433..1017798 (-) 366 WP_250406022.1 truncated hemoglobin YjbI -
  MUA47_RS04950 (MUA47_04950) - 1017902..1018495 (-) 594 WP_000224616.1 CYTH domain-containing protein -
  MUA47_RS04955 (MUA47_04955) - 1018681..1019028 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38695.27 Da        Isoelectric Point: 9.5127

>NTDB_id=672285 MUA47_RS04930 WP_000959277.1 1013301..1014287(+) (coiA) [Staphylococcus aureus strain IVB6195]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=672285 MUA47_RS04930 WP_000959277.1 1013301..1014287(+) (coiA) [Staphylococcus aureus strain IVB6195]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTTAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTTG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

96.951

100

0.97
  coiA Staphylococcus aureus N315

96.951

100

0.97