Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OIE74_RS15955 Genome accession   NZ_CP109181
Coordinates   3654369..3655502 (+) Length   377 a.a.
NCBI ID   WP_329383594.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01716     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3649369..3660502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE74_RS15940 (OIE74_15940) - 3649966..3650802 (+) 837 WP_329383584.1 hypothetical protein -
  OIE74_RS15945 (OIE74_15945) - 3650828..3652732 (-) 1905 WP_329383587.1 hypothetical protein -
  OIE74_RS15950 (OIE74_15950) radA/sms 3652912..3654324 (+) 1413 WP_329383590.1 DNA repair protein RadA Machinery gene
  OIE74_RS15955 (OIE74_15955) disA 3654369..3655502 (+) 1134 WP_329383594.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIE74_RS15960 (OIE74_15960) - 3655596..3656459 (-) 864 WP_329383596.1 hypothetical protein -
  OIE74_RS15965 (OIE74_15965) - 3656640..3657401 (+) 762 WP_329392317.1 phosphatase PAP2 family protein -
  OIE74_RS15970 (OIE74_15970) - 3657569..3658489 (+) 921 WP_329383599.1 A/G-specific adenine glycosylase -
  OIE74_RS15975 (OIE74_15975) - 3658813..3659436 (+) 624 WP_329392318.1 SigE family RNA polymerase sigma factor -
  OIE74_RS15980 (OIE74_15980) - 3659637..3660254 (+) 618 WP_329392319.1 hypothetical protein -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 40442.38 Da        Isoelectric Point: 5.0230

>NTDB_id=672219 OIE74_RS15955 WP_329383594.1 3654369..3655502(+) (disA) [Streptomyces sp. NBC_01716]
MAANDRAAAPGKSGGGSGGSGTEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVEAMCTGGFVLDVEFTAT
RLRELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVISVSQSMRLIALYVDGERRVLEE
SAAILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVSQRLEMVRRIATEIAEYVVELGTDGRLLALQLDE
LIAGVEPERELVVRDYVPEPTAKRSRTVAEAMTELDSLSHTELLELPVVARALGHSGSPETLDSAVSPRGYRLLAKVPRL
PGAIIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=672219 OIE74_RS15955 WP_329383594.1 3654369..3655502(+) (disA) [Streptomyces sp. NBC_01716]
GTGGCAGCCAACGACCGGGCAGCAGCACCCGGAAAGTCCGGTGGTGGCTCCGGTGGATCCGGCACCGAAGCGCTGATGCG
CGCCTCACTGAGCGCCGTGGCGCCCGGCATGGCGCTGCGTGACGGCCTGGAGCGGATCCTCCGGGGGAACACCGGCGGTC
TCATCGTCCTGGGCATGGACAAGACCGTCGAGGCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAATTCACCGCGACG
AGGCTCCGAGAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAAGACATCACCAAAATTCTGCGGGCCGGTGTCCA
GCTCGTCCCCGACGCCTCCATCCCGACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCG
GGTTCCCCGTCATCTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTTCTTGAGGAG
TCGGCCGCGATCCTGTCGCGTGCCAATCAGGCGCTCGCGACCCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTCGCCGG
CACGCTCTCCGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGTCGGCGGTCTCGCAGCGTCTGGAGATGGTGC
GCAGGATCGCCACGGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGGCGGCTTCTCGCCCTCCAGCTGGACGAG
TTGATCGCGGGCGTCGAGCCCGAGCGTGAGCTCGTCGTACGGGACTATGTGCCCGAGCCGACCGCGAAGCGGTCCCGTAC
GGTCGCCGAGGCGATGACCGAGCTGGACTCGCTCTCCCACACCGAGCTGCTGGAACTGCCCGTCGTCGCACGGGCGTTGG
GTCACAGCGGATCGCCCGAGACGCTCGACTCGGCGGTCTCGCCGCGCGGGTACCGGCTGCTGGCCAAGGTGCCGCGGCTG
CCGGGCGCGATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTGGCGGCGAGTGTGGACGATCTCCA
GACGGTGGACGGGGTGGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGCCTGTCGCGGCTGGCGGAGTCGTCCATCCTGG
AGCGGTACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.658

94.695

0.432