Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MUA35_RS07950 Genome accession   NZ_CP094770
Coordinates   1629808..1630494 (-) Length   228 a.a.
NCBI ID   WP_262538652.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6201     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1624808..1635494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA35_RS07930 (MUA35_07905) rpsT 1625722..1625973 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  MUA35_RS07935 (MUA35_07910) holA 1626018..1626992 (-) 975 WP_001282559.1 DNA polymerase III subunit delta -
  MUA35_RS07940 (MUA35_07915) comEC 1627049..1629250 (-) 2202 WP_262607525.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MUA35_RS07945 (MUA35_07920) - 1629255..1629716 (-) 462 WP_000439693.1 ComE operon protein 2 -
  MUA35_RS07950 (MUA35_07925) comEA 1629808..1630494 (-) 687 WP_262538652.1 ComEA family DNA-binding protein Machinery gene
  MUA35_RS07955 (MUA35_07930) - 1630534..1631250 (-) 717 WP_115305447.1 class I SAM-dependent methyltransferase -
  MUA35_RS07960 (MUA35_07935) rsfS 1631253..1631606 (-) 354 WP_001088020.1 ribosome silencing factor -
  MUA35_RS07965 (MUA35_07940) yqeK 1631607..1632191 (-) 585 WP_262607526.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA35_RS07970 (MUA35_07945) nadD 1632181..1632750 (-) 570 WP_000725161.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA35_RS07975 (MUA35_07950) yhbY 1632753..1633043 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  MUA35_RS07980 (MUA35_07955) aroE 1633047..1633853 (-) 807 WP_262607527.1 shikimate dehydrogenase -
  MUA35_RS07985 (MUA35_07960) yqeH 1633867..1634967 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.55 Da        Isoelectric Point: 9.7859

>NTDB_id=672216 MUA35_RS07950 WP_262538652.1 1629808..1630494(-) (comEA) [Staphylococcus aureus strain IVB6201]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLSDQKMIFIPHKGQKNVEPQIGVKSVHVKN
GNINNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=672216 MUA35_RS07950 WP_262538652.1 1629808..1630494(-) (comEA) [Staphylococcus aureus strain IVB6201]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTATCAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAAAAGTGTGCACGTAAAAAAT
GGAAACATAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

97.357

99.561

0.969
  comEA Staphylococcus aureus N315

97.357

99.561

0.969