Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OIE74_RS09285 Genome accession   NZ_CP109181
Coordinates   2176736..2177521 (+) Length   261 a.a.
NCBI ID   WP_189109009.1    Uniprot ID   A0ABQ2EG48
Organism   Streptomyces sp. NBC_01716     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2171736..2182521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE74_RS09270 (OIE74_09275) - 2171917..2172444 (+) 528 WP_329380657.1 TerD family protein -
  OIE74_RS09275 (OIE74_09280) - 2172523..2175417 (-) 2895 WP_329380660.1 vitamin B12-dependent ribonucleotide reductase -
  OIE74_RS09280 (OIE74_09285) nrdR 2175670..2176179 (-) 510 WP_329380662.1 transcriptional regulator NrdR -
  OIE74_RS09285 (OIE74_09290) dinR/lexA 2176736..2177521 (+) 786 WP_189109009.1 transcriptional repressor LexA Regulator
  OIE74_RS09290 (OIE74_09295) - 2177593..2179563 (-) 1971 WP_329380665.1 ATP-dependent DNA helicase -
  OIE74_RS09295 (OIE74_09300) - 2179602..2181410 (-) 1809 WP_329392216.1 IucA/IucC family siderophore biosynthesis protein -
  OIE74_RS09300 (OIE74_09305) - 2181603..2182391 (-) 789 WP_329380667.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28237.96 Da        Isoelectric Point: 7.4238

>NTDB_id=672195 OIE74_RS09285 WP_189109009.1 2176736..2177521(+) (dinR/lexA) [Streptomyces sp. NBC_01716]
MTTAADSATITAQDRSQSRLEPVHAMNDAAANPEGVKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQQTDTTGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFRREDGHVWLLPHNAAY
QPIPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=672195 OIE74_RS09285 WP_189109009.1 2176736..2177521(+) (dinR/lexA) [Streptomyces sp. NBC_01716]
GTGACCACCGCAGCAGACAGCGCCACCATTACCGCCCAGGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCCATGAA
TGACGCAGCCGCAAATCCGGAGGGCGTAAAGCCCACCCGTTCGCTGCCCGGCCGACCTCCTGGAATCCGGGCGGACAGTT
CCGGTCTCACGGACCGGCAGCGGCGGGTCATCGAAGTCATCCGTGACTCCGTTCAGCGGCGGGGATATCCCCCGTCGATG
CGGGAGATCGGCCAGGCCGTCGGCCTGTCCAGCACTTCCTCGGTCGCCCATCAGCTGATGGCTCTGGAGCGCAAGGGATT
CCTCCGCAGGGATCCGCACCGGCCGAGGGCGTACGAGGTCCGGGGGTCGGACCAGCCGAGCACCCAGCAGACGGACACGA
CGGGCAAGCCCGCCGCGTCGTATGTGCCGCTCGTCGGCCGGATCGCGGCAGGTGGGCCGATCCTCGCCGAGGAGTCCGTC
GAGGACGTGTTCCCGCTCCCCCGCCAACTGGTGGGTGACGGCGAGCTGTTCGTCCTCAAGGTCGTCGGAGACTCGATGAT
CGAAGCGGCGATCTGCGACGGCGACTGGGTGACGGTCCGCCGCCAGCCGGTGGCGGAGAACGGGGACATCGTGGCCGCGA
TGCTGGACGGCGAGGCCACCGTCAAGCGCTTCCGGCGCGAGGACGGCCATGTCTGGCTGCTCCCGCACAACGCGGCGTAC
CAGCCGATTCCCGGCGACGACGCGACGATCCTCGGCAAGGTTGTGGCGGTCCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(143-255)

LexA DNA binding domain (LexA_DNA_bind)

(54-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

81.226

0.375