Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MUA94_RS09225 Genome accession   NZ_CP094768
Coordinates   1844562..1845548 (-) Length   328 a.a.
NCBI ID   WP_262537067.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6202     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1839562..1850548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA94_RS09200 (MUA94_09180) - 1839822..1840169 (-) 348 WP_001242102.1 hypothetical protein -
  MUA94_RS09205 (MUA94_09185) - 1840355..1840948 (+) 594 WP_064279420.1 CYTH domain-containing protein -
  MUA94_RS09210 (MUA94_09190) - 1841052..1841417 (+) 366 WP_262537061.1 truncated hemoglobin YjbI -
  MUA94_RS09215 (MUA94_09195) yjbH 1841440..1842246 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  MUA94_RS09220 (MUA94_09200) pepF 1842706..1844514 (-) 1809 WP_262537064.1 oligoendopeptidase F -
  MUA94_RS09225 (MUA94_09205) coiA 1844562..1845548 (-) 987 WP_262537067.1 competence protein CoiA Machinery gene
  MUA94_RS09230 (MUA94_09210) mecA 1845669..1846388 (-) 720 WP_001217728.1 adaptor protein MecA -
  MUA94_RS09235 (MUA94_09215) spxA 1846769..1847164 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  MUA94_RS09240 (MUA94_09220) trpS 1847459..1848448 (+) 990 WP_103204600.1 tryptophan--tRNA ligase -
  MUA94_RS09245 (MUA94_09225) - 1848568..1850190 (-) 1623 WP_262537074.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38653.23 Da        Isoelectric Point: 9.6530

>NTDB_id=672179 MUA94_RS09225 WP_262537067.1 1844562..1845548(-) (coiA) [Staphylococcus aureus strain IVB6202]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMMQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEVPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=672179 MUA94_RS09225 WP_262537067.1 1844562..1845548(-) (coiA) [Staphylococcus aureus strain IVB6202]
ATGTTAGTAGCTTTAAATGGAGAAAAAGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATGCAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGTGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963
  coiA Staphylococcus aureus MW2

96.341

100

0.963