Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MUA83_RS08330 Genome accession   NZ_CP094763
Coordinates   1706246..1706932 (-) Length   228 a.a.
NCBI ID   WP_072491736.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6221     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1701246..1711932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA83_RS08310 (MUA83_08305) rpsT 1702160..1702411 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  MUA83_RS08315 (MUA83_08310) holA 1702456..1703430 (-) 975 WP_001282572.1 DNA polymerase III subunit delta -
  MUA83_RS08320 (MUA83_08315) - 1703487..1705688 (-) 2202 Protein_1637 DNA internalization-related competence protein ComEC/Rec2 -
  MUA83_RS08325 (MUA83_08320) - 1705693..1706154 (-) 462 WP_000439693.1 ComE operon protein 2 -
  MUA83_RS08330 (MUA83_08325) comEA 1706246..1706932 (-) 687 WP_072491736.1 ComEA family DNA-binding protein Machinery gene
  MUA83_RS08335 (MUA83_08330) - 1706972..1707688 (-) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  MUA83_RS08340 (MUA83_08335) rsfS 1707691..1708044 (-) 354 WP_001088020.1 ribosome silencing factor -
  MUA83_RS08345 (MUA83_08340) yqeK 1708045..1708629 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA83_RS08350 (MUA83_08345) nadD 1708619..1709188 (-) 570 WP_262528804.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA83_RS08355 (MUA83_08350) yhbY 1709191..1709481 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  MUA83_RS08360 (MUA83_08355) aroE 1709485..1710291 (-) 807 WP_000666747.1 shikimate dehydrogenase -
  MUA83_RS08365 (MUA83_08360) yqeH 1710305..1711405 (-) 1101 WP_262528808.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25747.42 Da        Isoelectric Point: 9.6753

>NTDB_id=672087 MUA83_RS08330 WP_072491736.1 1706246..1706932(-) (comEA) [Staphylococcus aureus strain IVB6221]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLSDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=672087 MUA83_RS08330 WP_072491736.1 1706246..1706932(-) (comEA) [Staphylococcus aureus strain IVB6221]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCCGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTATCAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGAAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.238

99.561

0.978
  comEA Staphylococcus aureus N315

98.238

99.561

0.978