Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   MUA83_RS06275 Genome accession   NZ_CP094763
Coordinates   1279135..1280007 (+) Length   290 a.a.
NCBI ID   WP_262529864.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6221     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1274135..1285007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA83_RS06245 (MUA83_06240) - 1274281..1275048 (+) 768 WP_000176398.1 ribonuclease HII -
  MUA83_RS06250 (MUA83_06245) sucC 1275157..1276323 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  MUA83_RS06255 (MUA83_06250) sucD 1276345..1277253 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  MUA83_RS06260 - 1277479..1277535 (+) 57 Protein_1228 YSIRK-type signal peptide-containing protein -
  MUA83_RS06265 (MUA83_06260) - 1277539..1277691 (+) 153 Protein_1229 cell wall hydrolase -
  MUA83_RS06270 (MUA83_06265) fmhC 1277719..1278963 (+) 1245 WP_000672856.1 FemA/FemB family glycyltransferase FmhC -
  MUA83_RS06275 (MUA83_06270) dprA 1279135..1280007 (+) 873 WP_262529864.1 DNA-processing protein DprA Machinery gene
  MUA83_RS06280 (MUA83_06275) topA 1280181..1282256 (+) 2076 WP_078064619.1 type I DNA topoisomerase -
  MUA83_RS06285 (MUA83_06280) trmFO 1282412..1283719 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33460.93 Da        Isoelectric Point: 9.7131

>NTDB_id=672076 MUA83_RS06275 WP_262529864.1 1279135..1280007(+) (dprA) [Staphylococcus aureus strain IVB6221]
MIRLFLLKLYWAHFSTKQIHQFLMAFPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEGYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=672076 MUA83_RS06275 WP_262529864.1 1279135..1280007(+) (dprA) [Staphylococcus aureus strain IVB6221]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATTTCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGACATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACGAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCGCCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGTAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGAGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGGCTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.276

100

0.983
  dprA Staphylococcus aureus N315

97.931

100

0.979