Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   MUA07_RS06105 Genome accession   NZ_CP094750
Coordinates   1256362..1257234 (+) Length   290 a.a.
NCBI ID   WP_262542339.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6248     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1251362..1262234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA07_RS06075 (MUA07_06075) - 1251508..1252275 (+) 768 WP_000176398.1 ribonuclease HII -
  MUA07_RS06080 (MUA07_06080) sucC 1252384..1253550 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  MUA07_RS06085 (MUA07_06085) sucD 1253572..1254480 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  MUA07_RS06090 - 1254706..1254762 (+) 57 Protein_1193 YSIRK-type signal peptide-containing protein -
  MUA07_RS06095 (MUA07_06095) - 1254766..1254918 (+) 153 Protein_1194 cell wall hydrolase -
  MUA07_RS06100 (MUA07_06100) fmhC 1254946..1256190 (+) 1245 Protein_1195 FemA/FemB family glycyltransferase FmhC -
  MUA07_RS06105 (MUA07_06105) dprA 1256362..1257234 (+) 873 WP_262542339.1 DNA-processing protein DprA Machinery gene
  MUA07_RS06110 (MUA07_06110) topA 1257408..1259483 (+) 2076 WP_078064619.1 type I DNA topoisomerase -
  MUA07_RS06115 (MUA07_06115) trmFO 1259639..1260946 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33474.93 Da        Isoelectric Point: 9.5435

>NTDB_id=671910 MUA07_RS06105 WP_262542339.1 1256362..1257234(+) (dprA) [Staphylococcus aureus strain IVB6248]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TCMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=671910 MUA07_RS06105 WP_262542339.1 1256362..1257234(+) (dprA) [Staphylococcus aureus strain IVB6248]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGACATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATGTATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACGAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCGCCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGTAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGAGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.621

100

0.986
  dprA Staphylococcus aureus N315

98.276

100

0.983