Detailed information NTG0671902

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG894_RS27830
• Genome accession: NZ_CP109169
• Coordinates: 6181608..6182906 (+)
• Length: 432 a.a.
• NCBI ID: WP_030970081.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01724
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6176608..6187906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG894_RS27800 (OG894_27835)	-	6177731..6177925 (+)	195	WP_030921275.1	hypothetical protein	-
OG894_RS27815 (OG894_27850)	tig	6178461..6179849 (+)	1389	WP_313937268.1	trigger factor	-
OG894_RS27820 (OG894_27855)	-	6180114..6180719 (+)	606	WP_018551584.1	ATP-dependent Clp protease proteolytic subunit	-
OG894_RS27825 (OG894_27860)	clpP	6180767..6181450 (+)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG894_RS27830 (OG894_27865)	clpX	6181608..6182906 (+)	1299	WP_030970081.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG894_RS27835 (OG894_27870)	-	6182983..6183963 (-)	981	WP_329451889.1	hypothetical protein	-
OG894_RS27840 (OG894_27875)	-	6184102..6186723 (+)	2622	WP_313937266.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47284.11 Da
• Isoelectric Point: 4.8824

>NTDB_id=671902 OG894_RS27830 WP_030970081.1 6181608..6182906(+) (clpX) [Streptomyces sp. NBC_01724]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENAGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=671902 OG894_RS27830 WP_030970081.1 6181608..6182906(+) (clpX) [Streptomyces sp. NBC_01724]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGCCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAGGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGTGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATTCCCGAGTTCATCGGCCGCCTCCCCGTGCTTACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTCC
GGGCCATCATGGAGGAAGTCCTGCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTGGTCCGTAACAACGTCAACCCGACACTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509